Pseudomonas benzopyrenica: V6W80_19560
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Entry
V6W80_19560 CDS
T10550
Name
(GenBank) PilC/PilY family type IV pilus protein
KO
K02674
type IV pilus assembly protein PilY1
Organism
pben Pseudomonas benzopyrenica
Brite
KEGG Orthology (KO) [BR:
pben00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
pben02044
]
V6W80_19560
02035 Bacterial motility proteins [BR:
pben02035
]
V6W80_19560
Secretion system [BR:
pben02044
]
Type II secretion system
Pilin secretion/fimbrial assembly protein
V6W80_19560
Bacterial motility proteins [BR:
pben02035
]
Pilus system
Pilus assembly proteins
V6W80_19560
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
T4P_PilY1
PA14
PQQ_3
GLEYA
FG-GAP_3
Motif
Other DBs
NCBI-ProteinID:
WWM65891
LinkDB
All DBs
Position
4114838..4119949
Genome browser
AA seq
1703 aa
AA seq
DB search
MKHYLAGLLIGTMALPLVAKAVDDIAQTPLFVTDSVPPLNMLVMGRDHKLYYEAYNDASD
LNGDGVLDIGYKGYKVKDSGGIDYYGYFNSKLCYSYTNGRFVPTTAGTGNTGKECSNQWS
GDFLNYLATSRMDALRKVLYGGYRSTDDSGVTVLQGAYIPEDAHTWGKEYTSISVDGYDI
SRFAPLQAPLPGYRHLLAVTSLSDNGVPQLRVLTNVNLRIWNWVSIERPVGRDDCLNAKG
ARRNCLDSGPKDGWALVPPSNFTSLNIKTWAKSDSNHPDSTAAMDRLFRTEATNRRLCGS
QDISNGIYSFGANNNPFNGARTQGGLICGNDRYLTEIRGNLRVETTGTYRFAVDGDDAVD
VKIANNSLPTASWYGGHGALDAGSNNHSGSFYLQAGVEYNILFRQEEGEGGDAWGLYWQP
PDRVQAASRTDYNIQVEVCPNDVDSTNNTSLRESNCKRYPNGNYKPTGILHDYGETNKMY
FGLLSGSYKNHFYGGVLRSNIQSFARELNANTGQFCLDGNCGGAQGNVQGIVDTINRFRT
VDFNYGNYMYNCGFGRNPTSDLAGDPCYMWGTPTAEMMYETLRYFAGASGPTAAFDYSST
DTGVPDNQLGLAHPAWIAPYSRGNGGTGYPSCSVPAMTVLSDIYPNYDWKLPGSQWANFI
SSSDDPAPLKDLNVATETDAIGAAEGLNGTTVFIGETKADGAPINADSAPTPKTLPTLSR
IRGLAPEEPGKQGTYYSAGIARFAARHYFGGGNKQMITYAVALASPFPKIEFPVGQNKIT
LVPFAKSVVEDPDNNRYQPTNQIADFYVQKLANTTVDNTDSSVNEGRPYAEFRINWEDSE
EGADFDMDAIVLYTLAVVPDPQDDNKLKLRVNLNSEYAAGSNKQHMGYTISGTDHDGLYL
EVCDLRDGTVNNGQREVCDGQTAYRLNTPPGRPAGWCINKLSNDECRGLPPTATRTFNAT
GVGAGVLKDPLWYAAKYGTPDNNWDSNGDDVPDNYLLVTNALTLKDQLNKAFSNVIQRNS
SITRVTVDTNRNEQGSETGRTVYRTTFNADDWTGKLIKETYTNGTAVPTVVNASIPTSGR
IVKMAGGPDGLQDFTYDNLRGRTFGGQDLQALMNQNSSGNTDGLGADRVSFLRGACTSTN
CTNNFRTRNSLLGDIVNSSPVQVGAPNYLAYRVDPVDGSAGSYALFQSAKASRRPQIYVG
ANDGMLHAFDAATLEEKFAFVPTPVIPKLNRLTARDYGTTTSHQYYVDGRLATADVYFDN
KWHTVLVGTLGGGGRGLFALDITDPDAIKLLWEFTSDSSATEDATTHRSNLGYNFGPPTI
TRLHTGDWAAVFGNGYYSDNADSDKAILYAVKISDGTLIKAIEATSPTTGSNGLSAVQVA
DYNGDVVADAAYAGDLLGNLWRFDLTSQNTSAPFNRDSDGTSQADSFAVAFGGHPLYRAR
TSDQDTGHPQAITAAPVLIQHPTLKGYLVTFATGRYLSVNDKLSPFDIQTVYGIWDRWTL
SQETNADMVNAHNRASLQEQTITSATYSSGTVTRNVRTFSANAMNWYKDVTSDAGADADA
DADSQVDRWGWYVDLKPVGTSTNTGERVIFPLKTLGDTLLFTSITPNADPCSAGIDSTLY
GIDGKTGGRTRYNVFDLNNDGRIDVGDSVVGNLVVSGIEGTVGDNTLAGDQMLGSNGATP
LGVHGGPTSSGRQSWRLLPPPTP
NT seq
5112 nt
NT seq
+upstream
nt +downstream
nt
atgaaacactacctggcaggattactgatcgggaccatggcgttacccctggtagccaag
gcagtcgacgatatagcccaaacgcccctgttcgtcacggactcagtgcccccgttgaat
atgctggtaatggggcgcgaccacaaactctattacgaagcctataacgacgcttcggac
ctgaacggcgatggcgttctggacattggctacaagggttacaaggtcaaggattctggg
ggtatcgattactacggttacttcaactccaagctctgctacagctacaccaacggcaga
ttcgtccccacaaccgcaggcacgggcaacacgggcaaggagtgctcgaaccagtggagt
ggcgacttcctgaactatctggccacctcgcgcatggatgcgttgcgcaaggtgctctat
ggaggctatcgaagcacagacgacagcggcgtcacggtattgcagggcgcctatataccc
gaggatgctcacacctggggcaaggaatacaccagtatctcagtggacggctatgacatc
agccgcttcgcccccttgcaagcccccttgcccggttatcggcatctgctcgcggtcacc
tccctgagtgacaacggcgttccgcagttacgggtcttgaccaacgtcaaccttcggatc
tggaactgggtatcgatcgaacgtcccgtcggccgtgacgattgcttgaatgccaaagga
gcacgcagaaattgtctggattcaggtccgaaagacggctgggcactggtcccgcccagc
aacttcaccagtctgaatataaagacgtgggcaaagtccgacagcaaccatcctgacagc
accgctgcgatggatagactattcagaaccgaggccacaaaccgccgcctctgcggaagc
caggacatcagcaatggcatctacagctttggggccaacaacaaccctttcaatggtgca
cgaacgcaaggcggcctaatctgcggtaacgatcgttacctcaccgagatcaggggaaat
ttaagagtagaaacaacagggacctacagattcgcggtcgatggcgatgatgccgttgac
gtcaagatcgccaacaacagcctcccgacggctagctggtacggtggtcatggtgccctg
gatgcgggtagcaataaccattctggctccttctacctgcaagcgggagtagagtacaac
atcctttttcgccaggaagagggcgaaggcggcgacgcctggggtttgtactggcagccc
ccggacagggtacaggctgcgagccgcaccgattacaacatccaggtagaggtctgcccc
aacgacgtcgactcgacgaacaatacaagcctgcgcgagagcaattgcaagcgctatccc
aatggcaactacaagccaactggaatccttcatgactacggggagaccaacaagatgtat
tttggtctcctaagtggctcttacaagaatcacttctatggcggcgtactgagatccaac
atccaaagtttcgccagggaactcaatgccaataccggccaattttgcctcgatggtaac
tgtggcggtgcccagggcaacgttcaagggatcgtggataccatcaaccgtttccgtacc
gtagatttcaactacggcaactatatgtacaactgtggtttcggccgtaacccgaccagc
gatctcgccggagacccctgttacatgtggggcacacctacggcggagatgatgtacgaa
accttacgctattttgccggcgcctcagggcccaccgccgccttcgactattcatctacg
gacacgggagtgcccgacaaccaactgggtctcgcccatccggcttggatcgcgccctat
tcccgtggtaatggtggaaccggctatcccagctgctcggttcctgccatgaccgtgctg
agcgacatctatcccaactacgactggaagctgcctggtagccaatgggcaaacttcatc
agcagcagcgacgatcctgcccccctcaaagacctgaacgtcgcaacggagaccgacgcc
ataggcgcggccgaagggctgaatggcacaacggtcttcattggcgagaccaaagcagac
ggggcacctatcaacgcagatagcgcacctacgccaaagaccctacccacactgtcgcga
attcgcggcctcgcgcccgaagagccgggcaagcagggcacctattattccgcaggcatc
gcccgcttcgccgccaggcattactttggtggcggcaacaagcagatgatcacctatgcc
gtagccttagcttccccctttcccaagatcgaattcccggtcggccagaacaagataacc
ctggtgcccttcgccaaatcggtagtagaggacccagacaacaatcggtaccagcctacc
aaccagatcgccgatttctatgtacagaagctggccaataccacagtggacaataccgac
agcagcgtgaacgagggccgcccctacgccgagttccgcatcaactgggaagatagtgaa
gagggtgccgacttcgacatggacgccatcgtgctttatacgctggcggtggttcctgac
ccacaagacgacaacaaactcaaactcagggtaaacctgaattccgaatatgccgcgggc
agcaacaagcaacacatgggctacaccatatcgggcaccgaccacgacggtctctatctc
gaagtctgcgatcttcgagacggaacggtcaacaatggccagcgcgaagtctgcgatggc
cagacggcctatcgcctcaatactccccctggcagacccgccggttggtgcatcaacaag
ctatccaacgacgaatgccgagggttacccccaactgcaacgcgtaccttcaacgccacc
ggtgtcggcgccggggtactcaaggatccgctctggtacgccgccaagtacggcaccccg
gacaacaactgggacagcaacggcgacgacgttccggacaactacctgctggtgaccaat
gcacttaccctcaaggatcagttgaacaaggcgttcagcaacgttattcaacggaacagc
tcgatcacccgggtcaccgtagacaccaatcgcaacgaacagggctccgagacaggccgt
accgtataccgaaccaccttcaatgccgatgactggaccggcaagctgatcaaggaaacc
tataccaatggcacagcagtgcccacggtcgtgaacgccagcatccccactagcggccgc
atcgtcaagatggcgggggggcccgacggcctgcaggatttcacctatgacaacctaagg
ggacgcaccttcggcggccaagacctgcaagcgctgatgaaccagaattcatccggcaat
acagacggacttggcgcggaccgggtcagtttcctgcgaggtgcctgtacatcgaccaat
tgcacgaacaacttccgcacgcgcaactcgctgctgggcgatatcgtcaactcttcgcca
gtgcaggtaggggcgcccaactatctagcttaccgagtcgaccccgtggatggcagcgct
ggttcctatgccttgttccagagcgccaaggcgtcacggcgtccgcagatctatgtcggc
gcgaacgatggcatgctgcatgccttcgatgccgcaaccctggaggaaaagttcgccttc
gtaccgacaccggtcattcccaagttgaaccgtctgacggccagggactacggcaccacg
acctcccatcaatactacgtcgatgggcggctggcgacggcagatgtctatttcgataac
aaatggcacaccgtcctggtcggcaccttgggtggcggcgggcgcgggctcttcgcgttg
gatataaccgatccggacgctatcaaactgttgtgggaatttacctccgatagcagcgcg
acggaggatgccactacccacaggagcaaccttggctacaatttcggcccgcccaccatc
acccgcctgcacacgggtgactgggccgccgtcttcggtaacggctactacagcgacaac
gccgatagcgacaaggccatcctctacgccgtgaaaatcagcgacggcaccctcatcaag
gcaatcgaagctacgagcccgacaacaggcagcaatggcctttcggcggtccaagtggct
gactacaacggcgatgtcgtcgccgacgccgcctatgcaggggatctactcggtaacctt
tggcgtttcgatctgacgagccaaaacacctccgcccccttcaaccgcgactcggatggt
accagtcaggccgactccttcgcggtggcctttggcggccatccgctctatcgagccagg
accagtgatcaggataccggtcacccccaggcgatcactgcagcgcccgtactgattcag
caccccaccctcaaaggctacctggtgaccttcgcaacgggacgctatctcagtgtcaac
gacaagctctcgcccttcgacatccagaccgtgtatggcatctgggatcgctggaccctg
agccaggagaccaatgccgacatggtcaatgcgcacaaccgcgcatcgctgcaagagcag
acgataacgtcagccacttactccagcggtaccgtcacccgcaacgtccgtacgttctcc
gcgaacgcgatgaattggtataaggatgtgacgagtgatgcaggtgccgatgccgatgct
gatgctgattcacaggttgatcgctggggctggtacgtcgatctcaaacccgtagggacg
agtaccaatacgggagaacgagtgattttccccctgaagaccctgggtgacaccctgctc
ttcaccagcattacccccaacgccgatccctgctcggccggcatcgatagcacgctctat
ggtatcgatggcaaaacaggaggtcgcacccgctataacgtcttcgatcttaataacgat
ggccggatagacgtcggtgacagcgtagttggaaaccttgtggtgtctgggatagaagga
accgtaggagacaacacgctggccggagaccaaatgctcggctcaaacggagctacccct
ctaggcgtccacggcggacctacctccagtggtcgccaatcctggcgattgcttccccct
cctacgccctga
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