KEGG   Pseudomonas benzopyrenica: V6W80_19800
Entry
V6W80_19800       CDS       T10550                                 
Symbol
hsdR
Name
(GenBank) type I restriction-modification system endonuclease
  KO
K01153  type I restriction enzyme, R subunit [EC:3.1.21.3]
Organism
pben  Pseudomonas benzopyrenica
Brite
KEGG Orthology (KO) [BR:pben00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:pben02048]
    V6W80_19800 (hsdR)
Enzymes [BR:pben01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.21  Endodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.21.3  type I site-specific deoxyribonuclease
     V6W80_19800 (hsdR)
Prokaryotic defense system [BR:pben02048]
 Restriction and modification system (R-M system)
  Type I R-M system
   V6W80_19800 (hsdR)
SSDB
Motif
Pfam: ResIII EcoEI_R_C SWI2_SNF2 DEAD Helicase_C DUF4145 AAA_19 SLFN-g3_helicase UvrD-helicase HSDR_N Golgin_A5 HalX AAA_34 SNF2-rel_dom LMBR1
Other DBs
NCBI-ProteinID: WWM65936
LinkDB
Position
4169582..4173046
AA seq 1154 aa
MAESSNFAFFKEHDPVFFQLANAAERVFASDPNTTLIKLRQLGEALAQDLAVRAGIELVT
TLSQADLLYRLSRDIQLDGNIRNLFHTLRVEGNKATHGFRTQHRDALDGLRVARALAIWY
HQSFGAGGSSFKPGPFITPADPSEPLRDLQAQIERLRAELGDSRQQLEDHDQLAGLLKLE
KEKQASLAEKMNEDALVYEQLAQEREEELAKARADFEARLKTLQQQLEDQPQAVQQVTRK
TQQATSQFDLNEDLTRILIDQQLNDAGWEADSLDLTYGKGARPEKGKNKAIAEWPTCKPN
EDADYVLFAGLTSVAIVEAKRKRVNIANRITQAERYSRQLIITDDLQSAGQGAGWADGQG
GHFKVPFAFACNGRPYIKQLAELSGIWFRDLRSPANLRRSLQDFHTPGGLLDLLKRSRDE
AEAKLQQEGFAYLKLRTYQENAIKAVEEALADGRRQCLLAMATGTGKTRTIIGLMYRLLK
AERFRRILFLVDRSALGQQAIEAFNEATLEQNHTLAQIYDVKELGDMAAEAETRVQVATV
QAMVRRIFQSDTPPPIDAYDCIIVDEAHRGYTLDQEMTEGELAIRDVSQYLSQYRRVLDY
FDACRIGLTATPAKHTSEVFGPPIFTYSYREAVADDWLIDHEPPIRYQTELSQNGIHFAK
GESVSIIDTSTGEVDVAELEDELDFEIESFNRRVITPGFDQVICEQLAQELDPSGDEKAM
IFCVNQAHAERVKNLLDEALKDVHGEEYNQAAVQIITGQSDKVEQLIRQYKNERYPSIAI
TVDLLTTGIDVPRICHLVFMRRVRSRILYEQMKGRATRRCDEIGKTVFKIYDPVDLYAAL
EPVDTMKPLVKDPNITLDQLVSELTNPASLDAPGSQPETSHAHDVLDQLSQKVMRILRKA
SHKAETKPALKNKLAELENVWGVAPDKLHQHLHEMGPQQAAQFVRKHAQLLDQLATVQAL
LGSDHYPVISTHSDTLMVREQNYGAYQKPADYLESFNDFIKNQLNQSVALGVVVSRPQDL
TREQLREVRLLLDANNYSEANLQSAWRNQTNQEIAASIVGFIRQAALGEALLPFEQRVAK
AMEAIYALQPWTPVQRKWLDRLAKQLVHEVVIDEKQIGQAFRNDGGSTRLDKLLGGNLSV
VLDALNDNLWVQTG
NT seq 3465 nt   +upstreamnt  +downstreamnt
atggccgagagcagtaacttcgcctttttcaaagaacacgacccggtcttcttccaactc
gccaatgctgctgagcgagtattcgccagcgatcccaatacgacgctgatcaaactgcgg
cagttgggcgaagccctggctcaggaccttgcggtgagagcgggtatcgagctcgtcacc
accctctcgcaagccgacctgctgtatcgcctgagccgtgacatccagctcgatggcaac
atccgcaatctcttccacacgttacgcgtggaaggcaacaaggctactcacggattccgc
acccagcatcgcgacgcgctagatgggctgagggtcgctcgggccttggcgatctggtat
caccagtcattcggtgccggcggcagctccttcaagccagggcctttcatcacgcccgct
gatccaagtgaaccgctgcgtgatttgcaggcgcagatcgagaggcttcgcgccgaattg
ggcgacagtcgtcaacagctggaagaccacgatcagttagccggcctcttgaagctggaa
aaggaaaagcaagccagtctcgccgagaagatgaatgaggatgcgcttgtttacgagcag
cttgctcaagagcgagaggaagaattggccaaggcacgtgccgatttcgaggcgcgactc
aagacgctgcagcaacaactggaagatcaaccgcaagcggtccagcaggtcacacgcaaa
actcagcaggcaaccagccaattcgacctcaacgaagacctcacccgcattcttattgat
caacagctgaacgacgcaggctgggaagctgattcgctcgatctcacctacggcaaaggt
gctcgtcccgaaaagggcaagaacaaggcgattgccgaatggcctacctgcaagccgaac
gaagacgccgattatgtactgtttgccggcctcacctcggttgccatcgtcgaggccaaa
cgcaagcgcgttaatatcgccaaccgcatcacccaggccgagcgctattcgcgccagctg
atcattaccgatgatctgcaatcggctggacaaggcgctggctgggcggatggccagggt
ggccacttcaaagtcccgtttgccttcgcctgcaatggccgtccctatatcaaacagctc
gctgaattgtccggcatctggttccgcgatctgcgcagcccagccaatctgcgccggtcg
ctacaggacttccacacaccgggcggtctgctcgacctgctcaaacgcagccgtgacgag
gcggaagcaaagctgcagcaagaaggctttgcctatctgaagctgcgtacttaccaggaa
aacgcgatcaaggccgttgaagaggccctcgctgacggacgtcgccaatgtctgctggcc
atggccaccgggaccggcaagacccgtacgatcattggcttgatgtatcgcctgctgaaa
gcggagcgcttccgtcgcattctctttctggtcgaccgcagcgccctgggccaacaagcc
atcgaggccttcaacgaagcgaccctggaacagaaccacaccctggcgcagatctatgac
gtcaaggaactgggcgacatggccgccgaagccgaaacacgcgttcaggtcgccaccgta
caggcgatggtcaggcgcatcttccagtcagacactccgccgcccattgatgcctacgac
tgcattatcgtcgacgaggcccaccgcggttacaccctcgatcaagagatgaccgaaggc
gagttggcaatacgcgatgtcagccagtacctatcgcagtaccgccgcgtgctcgactat
ttcgacgcttgccgtatcggcctcacggcgacaccggccaagcacaccagcgaagttttc
gggccaccgattttcacctacagctatcgcgaagccgtggctgacgactggctgatcgat
cacgagccgccgattcgctaccagaccgaactcagccaaaatggcattcacttcgccaag
ggcgagagtgtcagcattatcgatacgagcaccggcgaggtggatgtcgccgaactcgag
gatgaactcgacttcgagatcgagtccttcaaccgccgggtgatcacgcctggcttcgac
caggtcatctgcgagcaactggcccaggagctcgacccttccggcgatgagaaggcgatg
atcttttgcgtcaatcaggcccatgccgagcgggtcaaaaatctgctcgacgaggcgctc
aaagacgtccacggcgaggagtacaaccaggccgctgtccagatcatcaccggacagagc
gacaaggtcgaacagctcattcgccaatacaagaacgagcgctacccgagcatcgccatc
acggtcgacctcctgaccacaggtatcgacgtaccgcgcatctgccatctggtgttcatg
cgccgggtgcgttcgcgcatcctctacgagcagatgaagggccgcgccacgcgccgctgc
gatgaaatcggcaagacggtattcaagatctacgatccggtcgacctgtacgccgccctc
gaacccgtcgacaccatgaagccgctggtgaaagacccgaacatcaccctggaccaactg
gtgagcgagctgaccaacccggccagcctcgacgccccaggcagccagccagagaccagc
catgctcacgacgtgctggaccagctcagccagaaggtcatgcgcatcctgcgcaaggcc
agccacaaggcagagaccaagccagccctcaaaaacaagctggccgaactggaaaacgtc
tggggcgttgccccggacaaactgcatcagcatttgcatgagatgggtccgcaacaggcc
gcacagttcgtccgtaagcacgctcaattgctcgatcagcttgccacggtccaggcgctg
ctcggatcagaccactatccggtcatctctacgcactcagatacgctcatggttcgtgag
cagaactatggtgcctatcagaagcccgctgactacctggaaagcttcaacgacttcatc
aagaaccagctgaatcaatcagtggccctcggtgtggtagtcagccgcccgcaagatctg
acccgtgagcagttgcgtgaagtgcggctgctgctcgacgcgaacaactacagcgaggca
aatctgcagagcgcctggcgcaaccagaccaatcaggaaatcgcggccagtatcgtcggt
ttcattcgtcaagccgccctcggggaggcgctactgcccttcgagcagcgcgtggccaaa
gccatggaagcgatctacgccctgcagccctggacacccgtgcagcgcaaatggctggat
cgtctcgccaagcagctggtgcacgaggtcgtcatcgatgaaaagcaaattggccaggcc
ttcaggaacgacggcggcagcacacggctggacaagctgctcggtggcaacctaagcgtg
gtactggacgccctgaatgacaatctgtgggtacagacgggatga

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