Pseudomonas benzopyrenica: V6W80_20610
Help
Entry
V6W80_20610 CDS
T10550
Symbol
dbpA
Name
(GenBank) ATP-dependent RNA helicase DbpA
KO
K05591
ATP-dependent RNA helicase DbpA [EC:
5.6.2.6
]
Organism
pben Pseudomonas benzopyrenica
Brite
KEGG Orthology (KO) [BR:
pben00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pben03009
]
V6W80_20610 (dbpA)
Enzymes [BR:
pben01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
V6W80_20610 (dbpA)
Ribosome biogenesis [BR:
pben03009
]
Prokaryotic type
rRNA helicases
V6W80_20610 (dbpA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
Cas3-like_C_2
P-loop_SecA
Motif
Other DBs
NCBI-ProteinID:
WWM69083
LinkDB
All DBs
Position
complement(4347384..4348718)
Genome browser
AA seq
444 aa
AA seq
DB search
MQANLAELGYLSMTPIQAASLPIILKGQDLIAQAKTGSGKTAAFGIGLLTGLNPRYFGCQ
ALVLCPTRELADQVARELRRLARTTPNLKILTLCGGMPLGPQIASLEHGAQVIVGTPGRV
QEHLRKGTLVLDGLNVAVLDEADRMLDMGFIDAIADILRQTPARRQTLLFSATYPEGIER
LAEDYLRAPLRISVESQHSETQIRQRFYEIAAQDRLAAVVRLLRHHRPASAVAFCQTRQQ
CQEVVEALHAQRISAAALHGDLEQRERDQVLAMFANRSLCVLVATDVAARGIDVAGLEAV
INVELSRDPAVHVHRIGRSGRAGEQGLALSLVAPAEASRAQAIEVQQGSPLDWQPLGALR
DTPEPLVPTMHTLALAAGKKDKLRPGDILGALTGDAGLPGAKIGKITLFDNQAFVAVERD
IARQALQRLSEGKIKGRSIKVRML
NT seq
1335 nt
NT seq
+upstream
nt +downstream
nt
atgcaggccaatctggccgaacttggctacctgagcatgacgcccatccaggcggccagc
ctgcccatcatcctcaagggccaggatctcatcgcccaggccaagaccggctcgggcaag
acggcggccttcggtatcggcctgttgacggggctcaacccgcgctatttcggctgtcag
gccctggtcctctgtccgacccgcgaattggcggatcaggtggcccgcgaactgcggcgc
ctggcgcgcaccacgcccaacctgaagatcctgaccctctgcggcggcatgccgctgggg
ccgcagatcgcctcactggagcacggcgcccaggtgatcgtcggcaccccggggcgggtg
caggaacacctgcgcaagggcaccctggtgctggacggtctcaacgtcgcggtgctcgac
gaagccgatcgcatgctcgacatgggcttcatcgacgccatcgccgacatccttcggcag
accccggcgcggcggcagacgctgctgttttccgcgacctacccggaaggcatcgagcgc
ctggccgaggactatctgcgcgcgccgctgcgcatcagcgtcgagagtcagcacagcgag
acccagatccgtcagcgcttctacgagatcgccgcccaggatcgcctggccgccgtggtg
cgcctgctccggcaccatcgcccggccagcgccgtggccttctgccagacccgccagcag
tgccaggaggtggtcgaggcgctgcacgcccagcgcatctccgccgctgccttgcatggc
gacctggagcagcgcgaacgggaccaggtgctggcgatgttcgccaaccgcagtctctgc
gtgctggtagccaccgacgtggcggcccgcggcatcgacgtagccggtctggaagccgtg
atcaacgtggagctgtcccgcgatccggcggtgcacgtgcatcgcatcggccgcagcggt
cgcgccggtgaacagggcttggcgctgtcgctggtggcgccggccgaggccagccgcgcc
caggccatcgaggtacagcagggttcgccgctggattggcagccgctgggtgccctgcgc
gacaccccggagccgctggtgccgaccatgcacaccctggccctggcggccggcaagaag
gacaagctgcgccccggcgacatcctcggcgccctgaccggcgacgccggcctgcccggt
gccaagatcggcaagatcaccctgttcgacaaccaggctttcgtcgccgtggaacgcgat
atcgcccgccaggcgctgcagcggctgagcgaaggcaagatcaaggggcgatcgatcaag
gtgcggatgttgtag
DBGET
integrated database retrieval system
