KEGG   Pseudomonas benzopyrenica: V6W80_22065
Entry
V6W80_22065       CDS       T10550                                 
Symbol
nrdE
Name
(GenBank) class 1b ribonucleoside-diphosphate reductase subunit alpha
  KO
K00525  ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
Organism
pben  Pseudomonas benzopyrenica
Pathway
pben00230  Purine metabolism
pben00240  Pyrimidine metabolism
pben01100  Metabolic pathways
pben01232  Nucleotide metabolism
Module
pben_M00053  Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP
pben_M00938  Pyrimidine deoxyribonucleotide biosynthesis, UDP => dTTP
Brite
KEGG Orthology (KO) [BR:pben00001]
 09100 Metabolism
  09104 Nucleotide metabolism
   00230 Purine metabolism
    V6W80_22065 (nrdE)
   00240 Pyrimidine metabolism
    V6W80_22065 (nrdE)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:pben03400]
    V6W80_22065 (nrdE)
Enzymes [BR:pben01000]
 1. Oxidoreductases
  1.17  Acting on CH or CH2 groups
   1.17.4  With a disulfide as acceptor
    1.17.4.1  ribonucleoside-diphosphate reductase
     V6W80_22065 (nrdE)
DNA repair and recombination proteins [BR:pben03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   Modulation of nucleotide pools
    V6W80_22065 (nrdE)
SSDB
Motif
Pfam: Ribonuc_red_lgC RNR_N Ribonuc_red_lgN DUF7825
Other DBs
NCBI-ProteinID: WWM66365
LinkDB
Position
4655611..4657752
AA seq 713 aa
MATSGLTPTGSDADYHALNAMLNLYGPNGELQLDKDRQAARQYFLQHVNQNTVFFHNLDE
KLGYLVDKGYYEAAVLEQYAPAFVKALFERAYAYKFRFQSFLGAFKYYTSYTLKTFDGQR
YLERYEDRVCMVALSLARGDERLAESLVDEMISGRFQPATPTFLNAGKRQRGELVSCFLL
RIEDNMESIGRAVNSALQLSKRGGGVAFLLSNVREVGAPIKRIENQSSGIIPIMKLLEDA
FSYANQLGSRQGAGAVYLNAHHPDILRFLDTKRENADEKIRIKTLSLGVVIPDITFELAK
RNADMYLFSPYDVERVYGVPFADISVSDKYAEMVADARIRKRKINAREFFQTLAEIQFES
GYPYLMFEDTVNRANPIAGRINMSNLCSEILQVNTPSRFDEDLGYEHVGQDISCNLGSLN
IARSMDSPDLGHTVETAIRGLTAVSEMSDIRCVPSVAAGNAASHAIGLGQMNLHGYLARE
HIHYGSPEGLDFTNLYFYTVTYHAVRASNRLAIERGQSFQGFADSKYASGAYFDQYTEGD
FTPRTPRVAELFEVAGIHLPTRADWQELKASVMQHGLFNRNLQAIPPTGSISYINHSTSS
IHPIVAKVEIRKEGKLGRVYYPAPYLADDNQEYYQDAYEIGPEKIIDTYAEATRHVDQGL
SLTLFFRDTATTRDINRAQIYAWKKGIKTLYYIRLRQAALEGTEVQGCVSCSL
NT seq 2142 nt   +upstreamnt  +downstreamnt
ttggcaacgtctggcctgaccccgaccggcagcgacgcggactatcacgcactcaacgcc
atgctcaatctctatggtcccaatggcgagctgcagctcgacaaggaccgccaggcggcg
cggcaatacttcctccagcacgtcaaccagaacacggtgttcttccataacctggacgag
aaactcggctatctggtggacaagggctactacgaggccgcggtgctggagcaatacgcg
ccggccttcgtcaaggcgctgttcgagcgcgcctatgcctacaaattccgcttccagagc
tttctcggcgccttcaagtactacaccagctacaccctcaagaccttcgacggccagcgc
tacctggaacgctacgaagaccgggtgtgcatggtcgccctgagtctggcgcgcggtgac
gaacgcctggccgagtccctggtggacgagatgatcagcgggcgcttccagccggccacc
ccgaccttcctcaacgccggcaagcgccagcgtggcgagctggtgtcctgcttcctgctg
cgtatcgaagacaacatggagtccatcggtcgcgcggtgaattcagcgctgcagctgtcc
aagcgcggcggcggcgtggccttcctgctgagcaacgtgcgcgaggtcggggcaccgatc
aagcgcatcgagaaccagtcctccggcatcatcccgatcatgaagctcctggaagacgcc
ttctcctacgccaaccagctggggtcgcgccagggcgccggggcggtctatctcaacgcc
caccacccggacattctcagattcctcgacaccaagcgcgagaatgccgacgagaagatc
cgcatcaagaccctgtccctcggcgtggtcatcccggacatcaccttcgagctggccaag
cgcaatgccgacatgtacctgttctcgccctatgacgtggagcgggtctatggcgtgccc
ttcgccgacatcagcgtgagtgacaagtacgccgagatggtggccgatgcgcgcatccgc
aagcgcaagatcaacgcccgggaattcttccagaccctggcagagatccagttcgaatcc
ggctacccgtacctgatgttcgaagacacggtgaatcgcgccaatcccatcgccgggcgc
atcaacatgagcaacctctgctcggagatcctgcaggtcaacacccccagccgcttcgac
gaagacctgggctacgagcatgtcggccaggacatctcctgcaacctgggctcgctgaac
atcgcccgcagcatggattcgccggacctgggccacaccgtggaaaccgccatccgcggc
ctaaccgcagtctcggaaatgagcgacattcgctgcgtgccctcggtggccgccggcaac
gccgcctcccacgccatcggcctggggcagatgaacctccacggttacctggcccgcgag
cacatccactacggctcgcccgaaggcctggatttcaccaacctgtacttctacaccgtc
acctaccacgcggtgcgcgcctccaatcggctggccatcgaacgtggccagagcttccag
ggcttcgccgattccaagtacgccagcggtgcctatttcgaccagtacaccgagggcgac
ttcaccccgcgtaccccgcgggtggccgagctgttcgaagtggccggcatccacctgccg
acccgcgccgactggcaggaactcaaggcctcggtgatgcagcacgggctgttcaaccgc
aacctccaggccatcccacccaccggctcgatctcctacatcaaccactccacctcgagc
attcaccccatcgtcgccaaggtggagatccgcaaggaaggcaagctgggccgcgtctac
tacccggcgccctacctggccgacgacaaccaggagtattaccaggacgcctacgagatc
ggcccggaaaagatcatcgacacctatgccgaggccacccgccatgtcgaccaggggctg
tcgctgacgctgttcttccgcgacaccgccaccacccgcgacatcaaccgggcgcagata
tacgcctggaagaaaggcatcaagacgctctattacatacgcctgcgccaggccgccctg
gaaggcaccgaggtgcagggctgcgtgtcctgcagcctgtga

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