Pseudomonas benzopyrenica: V6W80_23360
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Entry
V6W80_23360 CDS
T10550
Symbol
tssC
Name
(GenBank) type VI secretion system contractile sheath large subunit
KO
K11900
type VI secretion system protein ImpC
Organism
pben Pseudomonas benzopyrenica
Pathway
pben02025
Biofilm formation - Pseudomonas aeruginosa
Brite
KEGG Orthology (KO) [BR:
pben00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02025 Biofilm formation - Pseudomonas aeruginosa
V6W80_23360 (tssC)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
pben02044
]
V6W80_23360 (tssC)
Secretion system [BR:
pben02044
]
Type VI secretion system
Imp/Vas secretion system core components
V6W80_23360 (tssC)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VipB
VipB_2
Motif
Other DBs
NCBI-ProteinID:
WWM66613
UniProt:
A0ABZ2FP52
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All DBs
Position
4950635..4952113
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AA seq
492 aa
AA seq
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MTATLLQQPATDVVEDSGILDRIIAETRLAPHDESYGVAKRGISAFIEELLKPHNAQQPV
KKALVDRMIAEIDEKLSRQVDEILHHDQFQSLEAAWRGLRLLVERTDFRENNRIEMLNVS
KQDLLEDFEDSPDIVQSGLYKHVYTAEFGQFGGEPVGAIIANYDFDPSAPDIRTLQQVAA
VSAMAHAPFIAAAGPRFFGLESFTGLPDLKDLKDHFDGPQFAKWQSFREQEDARYIGLTL
PRFLLRTPYDPEENPVKTFAYRENVSQSHGHYLWGNTAYAFATRLTHSFAKYRWCPNIVG
PQSGGAVEDLPLHHFESMGEIETKIPTEVLISDRREYELADAGFIALTMRKGSDNAAFFS
ACSTQKPRFYGNSEEGRAAELNYKLGTQLPYLFIVSRLAHYLKVLQREQLGGTKERTDLE
LELNKWIRQFVADQENPSAEVRGRRPLRAASIRVSDVEGNPGWFRVGLSVRPHFKYQGAD
FTLSLVGKLDKE
NT seq
1479 nt
NT seq
+upstream
nt +downstream
nt
atgaccgccaccctgctccagcaacccgctaccgacgttgtcgaagacagcggcattctc
gaccgcatcatcgccgagacccgcctggccccccacgatgaaagctatggcgtggccaag
cgcggcatttccgccttcatcgaagaattgctcaagccgcacaacgcccagcagccggta
aagaaggcgttggtcgaccgcatgatcgctgagatcgacgagaagctcagtcgccaggtc
gacgagatcctgcaccacgatcaattccagtcgctggaagcggcctggcgcggcctgcgc
ctgttggtggagcgcactgatttccgtgaaaacaaccggatcgagatgctcaacgtctcc
aagcaagacctgctggaagactttgaggattcgccggacatcgtccagtcgggcctctac
aagcatgtctacaccgctgaattcggtcagttcggtggtgagccggttggcgccatcatc
gccaactacgacttcgatcccagcgcgccggatatccgtaccctgcaacaggtggcggcg
gtctcggccatggctcatgcccccttcatcgccgccgccggcccacgcttctttggcctg
gaaagctttaccgggctacccgacctcaaggatctcaaggatcacttcgacggtccgcaa
ttcgccaaatggcagagctttcgcgaacaggaagatgcccgctacatcggcctcaccctg
ccgcgcttcctgctgcgcaccccctacgatccggaagagaatccggtgaagacctttgcc
taccgcgagaacgtcagccagagccatggccactacctctggggcaacacggcctacgcc
ttcgccacccggctgacccacagcttcgccaagtaccgctggtgtccgaatatcgtcggt
ccgcaaagcggtggcgcggtggaagacctgccgctgcaccatttcgaaagcatgggcgag
atcgagaccaagatacccaccgaggtactgatctccgatcgtcgcgagtacgaattggcc
gatgctggctttatcgccctgaccatgcgcaagggcagcgacaacgccgcctttttctcc
gcctgctccacgcaaaagcccaggttttatggcaacagcgaagaaggccgcgccgccgag
ctgaactacaagctcggcacccagctgccctatctgttcatcgtcagccgcctggcgcac
tacctcaaggtgctgcagcgcgagcagctgggtggcaccaaggagcgcaccgacctcgag
ctggaactcaacaagtggatccgccagttcgtcgccgaccaggagaatcccagcgccgag
gtacgcggccgccggccgttgcgcgcggccagcatccgcgtcagtgatgtcgagggtaat
ccgggctggttccgcgtcggcctcagcgtgagacctcacttcaagtatcagggcgccgat
ttcaccctgtcgctggtcggcaagctggacaaggagtaa
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