Pseudomonas benzopyrenica: V6W80_23380
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Entry
V6W80_23380 CDS
T10550
Symbol
tssH
Name
(GenBank) type VI secretion system ATPase TssH
KO
K11907
type VI secretion system protein VasG
Organism
pben Pseudomonas benzopyrenica
Pathway
pben02025
Biofilm formation - Pseudomonas aeruginosa
pben03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
pben00001
]
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
V6W80_23380 (tssH)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02025 Biofilm formation - Pseudomonas aeruginosa
V6W80_23380 (tssH)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
pben02044
]
V6W80_23380 (tssH)
Secretion system [BR:
pben02044
]
Type VI secretion system
Imp/Vas secretion system core components
V6W80_23380 (tssH)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_2
AAA_lid_9
AAA
AAA_5
AAA_22
Clp_N
AAA_16
ClpB_D2-small
NBD_SMAX1
TniB
ATPase_2
NACHT
nSTAND3
AAA_7
AAA_29
nSTAND6
IstB_IS21
Sigma54_activat
AAA_18
AAA_25
DUF815
Hpr_kinase_C
SLFN-g3_helicase
DUF2240
Motif
Other DBs
NCBI-ProteinID:
WWM66617
UniProt:
A0ABZ2FSN7
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Position
4955303..4957831
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AA seq
842 aa
AA seq
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MLTLDLQHLINTLTDATRQDLEQAAQRCVRRGSRQILIEDLLAVLLESRDGLLDRALKAA
DIDPADFAATLQPRPGNAEGSDPVFDTELLLWLQDAVLIAQLELERSEVGSVALLLALLR
HPERLLGTRYGRLLERVNPAQLLDFVKTQQPLAAAVASASPLSRFTHDLSDQARTGRLDP
VLGRDAEIRQLVDILSRRRKNNPLVVGEAGVGKTAIVEGLALRIAAGEVPNSLRQVEIRT
LDLGLLQAGASVKGEFERRLQEVIDAVRQAPQPIVLFIDEAHTLIGAGGPAGGSDAANLL
KPALARGELRTIAATTWGEYRKYFEKDPALARRFQPVKLEEFDVASAITVLRGLAPTYAE
SHGVYLRDDAVVAAAELAARYLSGRQLPDKAVDVLDTCCARVRISLASPPPALDALRACL
AATERTLAAARRDADHGLLVAADSLDSLTATRDTERLAVEALQADWERQRELAERILTLR
TTAASTELAATRAELEQLQRQAGRLVSLEVCPQLVAEVIAAWTGLPVDQLARRHDQRLAR
FASDLRGRLRGQEQAVVAIDRALRAAAVGLNTTEAPVGVFLLVGPSGVGKTETALALAEL
LYGGERFLTTLNLSEFAEKHSVSRLIGAPPGYVGYGEGGLLTEAVRRQPYSVVLLDEVEK
ADPEVLNLFYQIFDRGQATDSEGRQIDFRNVLFLLTSNLASSEIQRLCRERRPDASSLAE
AIRPILTRHFKPALLARLRVVPYYPLDDDLLRELAVQKLDRVGQRLLARQVAFSYAPALP
DDLAARCRDDDSGARRIDLLLEQRVLPLLTDHLLDALATGQPLHRLHLDVNAVGELSCEV
TA
NT seq
2529 nt
NT seq
+upstream
nt +downstream
nt
atgctcactctggacctgcaacacctcatcaacaccctgaccgacgccacccgccaggac
ctggaacaggccgcgcaacgttgcgttcgtcgtggcagtcggcagatcctgatcgaagat
ctgctagcggtcttgctggaatcccgcgatggtctgcttgatcgcgccctgaaggccgcc
gacatcgatccagcggactttgccgccaccttgcaaccgcggccaggcaacgctgaaggc
agcgatccggtcttcgataccgagttgctgctgtggctgcaagatgccgtgctgattgcc
caactcgaactggaacggtcggaggtcggtagcgtcgccctactgctggcgctattgcgc
caccccgagcggctgttgggtacgagatacggacgcctgctggagcgagtgaatcctgcg
cagctcctggatttcgtcaagacccaacagcccctggcggctgcggtcgccagcgcgtcg
ccgctgagccgcttcacccatgaccttagcgaccaggcccgtaccggtcgcctggatccg
gtgttggggcgcgacgccgagatcaggcaactggtagatatcctctcgcgacggcgcaag
aacaatcccctggtggtaggcgaagcgggggtgggcaagaccgccatcgtcgagggcctg
gcactgcgcatcgcagccggcgaagtccccaacagcctgcgccaggtggaaatacgcacc
ctcgatctcggcctgctgcaggcgggtgccagcgtcaagggcgagttcgagcgtcgcctg
caggaggtgatcgacgccgtgcgtcaggcgccccagcccatcgtcctgttcatcgacgag
gcccataccctgatcggcgcgggcggcccggccggtggctcggatgcggctaacctgctc
aagccggcgctggctcgtggcgaactgcgcaccatcgccgccaccacctggggcgagtac
cgcaagtacttcgagaaagatccggcgctggcgcgacgcttccagccggtgaagctggag
gaattcgatgtcgccagcgccatcaccgtcctacgcggtctggcaccgacctatgccgag
agccatggtgtctacctgcgcgatgacgccgtggtggctgccgccgagctggccgcccgc
tatctgagcgggcgccagttgccggacaaagcagtggatgtgctcgacacctgttgcgct
cgggtgcgtatcagcctggccagtccgcctcctgccttggacgccttgcgcgcatgcctg
gccgcgaccgaacgcacgctcgccgccgcccgccgcgatgccgaccatggcctgctcgtc
gcggctgacagtctggacagccttaccgccacgcgggacaccgagcgcctggcagttgag
gcactgcaggccgactgggaacgtcagcgggagctggccgaacgcatcctgactttgcgt
acgaccgcggccagtaccgagctggccgcaacccgggcggagctggagcagctgcaacgg
caggctgggcggctggtcagcctggaggtctgcccgcagctggtggcggaggtgatagcg
gcctggaccggtcttccggtcgaccaactcgcccgacgccacgatcaacgccttgcccgc
tttgccagcgatctgcgtggacggctgcgtggtcaggagcaggcggtggtcgccattgat
cgcgccctacgcgcggcggcagtgggtctcaacaccaccgaggcgccggtcggcgtcttt
ctgctggtcggtcccagcggggtcggcaagacggaaaccgccctggcactggccgaattg
ctctatggcggtgagcgctttctcaccaccctcaacctgtcggaatttgccgagaaacat
agcgtgtcgcgcctgatcggcgcaccacccggctatgtcggctatggcgaaggaggtctg
ctcaccgaggccgtccgccgccaaccctattcggtggtcttgctggacgaggtggaaaag
gccgacccggaggtactcaatctcttctaccagatctttgatcgcggccaggccaccgac
agcgaagggcgacagatcgactttcgcaacgtgctctttctgctcacctccaacctggcc
agcagtgagatccagcggctgtgccgggagaggcgaccggacgcctcaagccttgccgaa
gccattcgccccatcctgacccgacacttcaaacccgccttgttggcccgcctgcgggtg
gtgccctactacccgctggacgacgatctgctgcgcgaattggcggtgcagaagctggac
cgtgttggtcaacgcctgttggcgcggcaggtcgccttcagctatgccccggccctgccg
gacgacctggcggcacgttgccgggacgacgacagcggtgcccggcgtatcgatctgctg
ctggagcagcgggtactgccgctgttgaccgatcacctgctcgatgccctggccacgggc
cagcccctgcaccggttgcatctcgacgtcaacgccgtaggcgaactgagttgcgaggtg
acggcatga
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