Pseudomonas benzopyrenica: V6W80_23405
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Entry
V6W80_23405 CDS
T10550
Symbol
tssK
Name
(GenBank) type VI secretion system baseplate subunit TssK
KO
K11893
type VI secretion system protein ImpJ
Organism
pben Pseudomonas benzopyrenica
Pathway
pben02025
Biofilm formation - Pseudomonas aeruginosa
Brite
KEGG Orthology (KO) [BR:
pben00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02025 Biofilm formation - Pseudomonas aeruginosa
V6W80_23405 (tssK)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
pben02044
]
V6W80_23405 (tssK)
Secretion system [BR:
pben02044
]
Type VI secretion system
Imp/Vas secretion system core components
V6W80_23405 (tssK)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
T6SS_VasE
Dicer_dsRBD
Motif
Other DBs
NCBI-ProteinID:
WWM66622
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All DBs
Position
4961145..4962476
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AA seq
443 aa
AA seq
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MQQLKVIWQEGMLLRPQHFQQNDRYHAEQLQTRTRRLGEPAWGFFDLTLDHQFLAMGKIV
ISQASGILPDGTLFDLGAEGEPLALDVPANTRDSAVWLALPLTSGQRLESRPLDQDDIVA
RYLSVDSEMADSHAGFGEPGTVSCGRPDFRLLLEDHPRLNAYVRLQVCQLLETAPDGSLE
LDTAFTPSVIQVRAAESLLAGLKEVSTLLAHRGEVLSQRLRQAGSLGTAEIGDFLLLQLV
NRHETVLRHCLDYEQLHPRSLFRELLALHGELATFAAADKRPDLNLNYRHADQTGSFAPL
FQALRQALSMVLEQHALHLPLQQRQYGIQVAPLQDHGLLANASFVLIARAECSTEELRQR
LPAHLKVGPVERIRQLVNLHLPGLTLKPLAVAPRQLPFHADRTYFVLELTAADTAQLEQS
GGFAFHVSGTFPGLDLAFWAIRS
NT seq
1332 nt
NT seq
+upstream
nt +downstream
nt
atgcagcaactcaaggtgatctggcaagaaggcatgctgctccggccgcagcatttccag
cagaacgaccgttatcacgccgagcaattgcagacccgcacccgtcgcctcggtgagccg
gcctggggatttttcgacctgaccctcgatcatcaatttctcgcgatgggcaagatagtg
atcagtcaggccagtggcatcctgcccgacggcaccctcttcgacctgggtgccgagggt
gaacccctggccctcgatgtaccggccaatacccgcgacagcgcggtctggctggcgctg
ccgctcaccagcggccagcgcctggaaagccgtccactcgaccaggacgacatcgtcgcc
cgttacctcagcgtcgacagcgagatggccgactcccatgccggtttcggtgagcctggg
acagtcagttgcggtcgtcccgactttcgcttgctgctcgaagaccatccccggctcaac
gcctatgtccgcctgcaggtctgccagctgctggaaacggcgccggacggcagcctggag
ctggataccgcctttacccctagcgtcatccaggtgcgagcggccgagtcactgctggcg
ggcctcaaggaggtcagcaccctgctcgcgcaccggggcgaggtgctctcccagcgcctg
cggcaggccggcagcctgggcaccgcagaaatcggcgatttcctgctgctgcaactggtc
aatcgccacgagaccgtcctgcgccattgcctggactacgagcaactgcatccgcgcagc
ctctttcgcgaattgctcgccctgcatggtgagctggccaccttcgcggctgccgacaag
cgccccgatctgaacctgaactatcgccacgccgaccagaccggcagctttgcgccgctg
ttccaggcgctgcgccaggcgctgtccatggtgctcgaacagcacgccctgcacctgccc
ctgcaacagcggcagtacggcatccaggtggcgccgctacaggaccacggcctcctggcc
aacgccagcttcgtgctcatcgccagagccgaatgcagtaccgaggagctgcgccagcgc
ctgccagcacacctcaaggtggggccagtggagcgcatccgccagttggtcaacctgcac
ctgccggggctcaccctcaaacccctggcggtcgcgccgcgccaattgcccttccatgcc
gacaggacctatttcgtcctcgaactcaccgccgccgacaccgcccagctcgagcagtcc
ggcggcttcgcctttcatgtctccggcacctttccgggcctcgacctcgccttctgggcg
atcaggagctaa
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