Pseudomonas berkeleyensis: HS968_08560
Help
Entry
HS968_08560 CDS
T12034
Name
(GenBank) MurR/RpiR family transcriptional regulator
KO
K19337
RpiR family transcriptional regulator, carbohydrate utilization regulator
Organism
pber Pseudomonas berkeleyensis
Brite
KEGG Orthology (KO) [BR:
pber00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pber03000
]
HS968_08560
Transcription factors [BR:
pber03000
]
Prokaryotic type
Helix-turn-helix
Other families
HS968_08560
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HTH_6
SIS
SIS_2
HTH_AsnC-type
HTH_31
HTH_IclR
HTH_24
DUF8299
HTH_Tnp_ISL3
RWP-RK
HTH_Crp_2
TetR_N
HTH_26
Motif
Other DBs
NCBI-ProteinID:
QMV66010
UniProt:
A0A7G5DW85
LinkDB
All DBs
Position
complement(1837394..1838254)
Genome browser
AA seq
286 aa
AA seq
DB search
MRNLLEQIQSRLDDLNKAERKVAEVILHDPQQATRLSIAALAQAAGVSEPTVNRFCRSFG
TNGYPELKMQLAQSLASGAAYVSRAVAADDGPDAYTRKIFGSTIASLDSACQSLDPQHIS
RAVDLLIQARQIHFFGLGASASVALDAQHKFFRFNLAVSAHSDVLMQRMIASVAHTGDLF
VIISYTGRTRELVEVARLARENGASVLGLTAAGSPLARASTLSLDIPLPEDTDIYMPMTS
RIIQLTVLDVLATGVTLRRGVDFQPHLRKIKESLGASRYPADEEPL
NT seq
861 nt
NT seq
+upstream
nt +downstream
nt
gtgcgcaacctgctggaacagatccagagccgcctggacgacctgaacaaggccgaacgc
aaggtggccgaagtgatcctccacgatccgcagcaggccactcgcctgagcatcgctgcc
ctcgcccaggctgccggcgtcagcgagccgacggtcaaccgcttctgccgctcgttcggc
accaatggctacccggaactgaagatgcagctggcgcaaagcctggccagcggcgccgcc
tacgtcagccgcgcggtcgcggccgatgatggccccgatgcctatacccggaagatcttc
ggcagcaccatcgcctcgctggacagcgcctgccagagcctcgacccgcagcacatcagc
cgcgccgtcgacctgctgatccaggcccggcagatccacttcttcggccttggcgcctcg
gcctcggtggcgctggatgcccagcacaagttctttcgcttcaacctggcggtctcggcc
cattccgacgtgctgatgcaacgcatgatcgcctcggtggcgcacaccggtgacctgttc
gtgatcatttcctacaccggacgcacccgtgaactggtcgaggtagcgcgcctggctcgc
gaaaacggcgcctcggtgctcggcctcactgccgccggctcgccactggccagggccagc
accctgagcctggacattccgctgccggaagacaccgacatctacatgccgatgacctcg
cgcatcatccagctcaccgtgctcgacgtgcttgctaccggcgtcaccctgcgccgcggc
gtggatttccagccgcacctgcgcaagatcaaggaaagcctaggtgccagccgttacccg
gcggatgaagagccgctgtaa
DBGET
integrated database retrieval system
