Pseudomonas benzenivorans: SBP02_00090
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Entry
SBP02_00090 CDS
T10569
Name
(GenBank) 3'-5' exonuclease
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
pbez Pseudomonas benzenivorans
Pathway
pbez03030
DNA replication
pbez03430
Mismatch repair
pbez03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pbez00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
SBP02_00090
03430 Mismatch repair
SBP02_00090
03440 Homologous recombination
SBP02_00090
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pbez03032
]
SBP02_00090
03400 DNA repair and recombination proteins [BR:
pbez03400
]
SBP02_00090
Enzymes [BR:
pbez01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
SBP02_00090
DNA replication proteins [BR:
pbez03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
SBP02_00090
DNA repair and recombination proteins [BR:
pbez03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
SBP02_00090
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
Motif
Other DBs
NCBI-ProteinID:
WPC05186
UniProt:
A0ABZ0PWQ7
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All DBs
Position
complement(18418..19155)
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AA seq
245 aa
AA seq
DB search
MSLPESLRKTSHAVIPDWPRILGDLAESTRDERLARFYRAGTVSADTPLEQVPLLALDVE
TTGLDSQRDSIVSLGLVPFNLHRIRCGAAKYWVVKPVCELSSQSVTFHHITHSDIRDAPP
LVNVLDELLAAMAGKVMVVHYRRIERGFLDQAMRQLVGEGLHFPLIDTMQLEARLHLGKH
RPGWFDRLLGKKPVSIRLADTRLRYGLPLYQAHHALTDALATAELLQAQVASLDAAQIAV
GELWQ
NT seq
738 nt
NT seq
+upstream
nt +downstream
nt
atgagcctgcccgaaagcctgcgcaagaccagccacgccgtgatcccggactggccgaga
atactcggcgacctggcggagagcacccgcgatgagcggctggcgcgcttctaccgggcc
ggcacggtgagcgccgatacgcccctggagcaggttccgttgctcgccctcgatgtggag
accaccggcctggacagccagcgcgactcgatcgtcagcctgggcctggtacccttcaat
ctgcaccgcatccgctgtggcgcggccaaatactgggtggtcaagccggtctgcgaactg
agcagccagtcggtgaccttccatcacatcacccactcggatatccgcgacgcgccgcct
ctggtcaacgtgctcgacgagctgctggccgccatggccggcaaggtgatggtcgtgcat
taccggcgcatcgaacgcggctttctcgatcaggccatgcgccagctggtcggcgaaggg
ctgcactttccactgatcgacaccatgcagctggaagcccgcctgcacctgggcaaacat
cggcctgggtggtttgaccggctattgggcaagaagccggtgtcgatccgtctggccgat
actcgcctgcgctatggcctgccgctgtaccaggcccaccacgccctgaccgatgccctg
gccaccgccgaactgctgcaggcccaggtggccagcctcgacgcggcacagatcgccgtc
ggcgaactctggcaataa
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