KEGG   Pseudomonas benzenivorans: SBP02_00090
Entry
SBP02_00090       CDS       T10569                                 
Name
(GenBank) 3'-5' exonuclease
  KO
K02342  DNA polymerase III subunit epsilon [EC:2.7.7.7]
Organism
pbez  Pseudomonas benzenivorans
Pathway
pbez03030  DNA replication
pbez03430  Mismatch repair
pbez03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:pbez00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    SBP02_00090
   03430 Mismatch repair
    SBP02_00090
   03440 Homologous recombination
    SBP02_00090
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:pbez03032]
    SBP02_00090
   03400 DNA repair and recombination proteins [BR:pbez03400]
    SBP02_00090
Enzymes [BR:pbez01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     SBP02_00090
DNA replication proteins [BR:pbez03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     SBP02_00090
DNA repair and recombination proteins [BR:pbez03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     SBP02_00090
SSDB
Motif
Pfam: RNase_T Rv2179c-like
Other DBs
NCBI-ProteinID: WPC05186
UniProt: A0ABZ0PWQ7
LinkDB
Position
complement(18418..19155)
AA seq 245 aa
MSLPESLRKTSHAVIPDWPRILGDLAESTRDERLARFYRAGTVSADTPLEQVPLLALDVE
TTGLDSQRDSIVSLGLVPFNLHRIRCGAAKYWVVKPVCELSSQSVTFHHITHSDIRDAPP
LVNVLDELLAAMAGKVMVVHYRRIERGFLDQAMRQLVGEGLHFPLIDTMQLEARLHLGKH
RPGWFDRLLGKKPVSIRLADTRLRYGLPLYQAHHALTDALATAELLQAQVASLDAAQIAV
GELWQ
NT seq 738 nt   +upstreamnt  +downstreamnt
atgagcctgcccgaaagcctgcgcaagaccagccacgccgtgatcccggactggccgaga
atactcggcgacctggcggagagcacccgcgatgagcggctggcgcgcttctaccgggcc
ggcacggtgagcgccgatacgcccctggagcaggttccgttgctcgccctcgatgtggag
accaccggcctggacagccagcgcgactcgatcgtcagcctgggcctggtacccttcaat
ctgcaccgcatccgctgtggcgcggccaaatactgggtggtcaagccggtctgcgaactg
agcagccagtcggtgaccttccatcacatcacccactcggatatccgcgacgcgccgcct
ctggtcaacgtgctcgacgagctgctggccgccatggccggcaaggtgatggtcgtgcat
taccggcgcatcgaacgcggctttctcgatcaggccatgcgccagctggtcggcgaaggg
ctgcactttccactgatcgacaccatgcagctggaagcccgcctgcacctgggcaaacat
cggcctgggtggtttgaccggctattgggcaagaagccggtgtcgatccgtctggccgat
actcgcctgcgctatggcctgccgctgtaccaggcccaccacgccctgaccgatgccctg
gccaccgccgaactgctgcaggcccaggtggccagcctcgacgcggcacagatcgccgtc
ggcgaactctggcaataa

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