Pseudomonas benzenivorans: SBP02_00195
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Entry
SBP02_00195 CDS
T10569
Symbol
uvrD
Name
(GenBank) DNA helicase II
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
pbez Pseudomonas benzenivorans
Pathway
pbez03420
Nucleotide excision repair
pbez03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
pbez00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
SBP02_00195 (uvrD)
03430 Mismatch repair
SBP02_00195 (uvrD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pbez03400
]
SBP02_00195 (uvrD)
Enzymes [BR:
pbez01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
SBP02_00195 (uvrD)
DNA repair and recombination proteins [BR:
pbez03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
SBP02_00195 (uvrD)
MMR (mismatch excision repair)
Other MMR factors
SBP02_00195 (uvrD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PcrA_UvrD_tudor
UvrD_C_2
AAA_30
Viral_helicase1
AAA_22
AAA_11
DUF3553
FitA-like_RHH
Motif
Other DBs
NCBI-ProteinID:
WPC05204
UniProt:
A0ABZ0PVI6
LinkDB
All DBs
Position
complement(37958..40144)
Genome browser
AA seq
728 aa
AA seq
DB search
MRDDLSLLLNSLNDAQRQAVAAGLGRQLVLAGAGSGKTRVLVHRIAWLIQVEGASPHSVL
SVTFTNKAAAEMRARIEQMLGLNPAGMWVGTFHGLAHRLLRAHWQEAGLAENFQILDSDD
QQRLVKRVIRELGLDEQRWPARQAQWFINGQKDEGLRPQHIQPGGDLFLATMLKIYEAYE
AACARAGVIDFSELLLRALDLWRDKPGLLEHYQRRFRHILVDEFQDTNAVQYAWLRLLAK
GGDSLMVVGDDDQSIYGWRGARIENIQQFSDDFKDAEVIRLEQNYRSTAGILKAANALIA
HNQGRLGKELWTEGGDGEPISLYAAFNEHDEARYVVESIEDALRKDGLRRSEIAILYRSN
AQSRVLEEALLREKIPYRIYGGQRFFERAEIKNAMAYLRLLDGRGNDAALERVVNVPARG
IGEKTVEAIREYARGHEVSMWEAVRLMLAGKALPGRAAGALAGFVELIDNLAAKVLEMPL
HLMTQTVIEQSGLIAYHQAEKGEKAQARIENLEELVSAARAFDNDEDDELTPLQAFLSHA
SLEAGDTQAAENEDSVQLMTLHSAKGLEFPQVFLVGMEEGLFPHKMSLEEPGRLEEERRL
AYVGITRAMHKLVITYAETRRLYGSETYNKVSRFVREIPPQLIQEVRLSGSVSRPFATPG
RGTAGGMFAGSAVPDTAFSLGQRVQHALFGEGTILNFEGSGAQARVQVNFENEGSKWLML
SYAKLQAL
NT seq
2187 nt
NT seq
+upstream
nt +downstream
nt
atgcgcgacgatctctcccttctgctcaactccctcaacgatgcccaacgccaggccgtg
gccgccggcctgggccgtcagttggtcctggccggcgccggctccggcaagacccgggtg
ctggtgcaccgcatcgcctggctgatccaggtcgagggtgcctcgccccacagcgtgctg
tcggtgaccttcaccaacaaggccgccgccgagatgcgcgcgcgcatcgaacagatgctc
ggcctgaatccggccggcatgtgggtcggcaccttccacggcctggcccaccgcctgctg
cgcgcccactggcaggaggccgggctggccgagaacttccagatcctcgactccgacgac
cagcagcgcctagtcaagcgggtgatccgcgagctgggcctggacgagcagcgctggccg
gcgcgccaggcccagtggtttatcaacgggcagaaggacgaaggtctgcgtccgcagcac
atccagcccggcggcgacctgttcctcgccaccatgctgaagatctacgaggcctacgag
gcggcctgcgcccgcgccggggtcatcgacttctccgagctgctgctgcgcgccctggac
ctgtggcgcgacaagcccggcctgctcgagcactaccagcggcgcttccgccacatcctg
gtggacgagttccaggacaccaacgccgtgcagtacgcctggctgcgcctgctcgccaag
ggcggcgacagcctgatggtggtgggcgacgacgaccagtcgatctacggctggcgcggc
gcgcggatcgagaacatccagcagttctccgacgacttcaaggacgccgaggtgatccgc
ctggagcagaactaccgctccaccgccggcatcctcaaggccgccaacgctctgatcgcc
cacaaccaggggcgcctgggcaaggaactgtggaccgagggcggcgacggcgagccgatc
agcctgtacgcggcgttcaacgagcacgacgaggcgcgctacgtggtcgaatcgatcgag
gacgccctgcgcaaggacggcctcaggcgcagcgagatcgccatcctctatcgctccaac
gcccagtcgcgggtgctggaggaggccctgctacgcgagaagatcccctaccgcatctac
ggcggccagcgcttcttcgagcgcgccgagatcaagaacgccatggcctacctgcgcctg
ctcgacggccgcggcaacgacgcggcgctggaacgagtggtcaacgtgccggcccgcggc
atcggcgagaagaccgtcgaggcgatccgcgaatacgcccgcggccacgaggtgtcgatg
tgggaggcggtgcgcctgatgctggccggcaaggccctgcccggccgcgcggccggcgcc
ctggccggctttgtcgagctgatcgacaacctcgccgccaaggtactggagatgccgctg
cacctgatgacccagacggtcatcgagcagagcgggctgatcgcctaccaccaggcggaa
aagggcgagaaggcccaggcgcgcatcgagaacctcgaggaactggtcagcgccgcacgc
gccttcgataacgacgaagacgacgagctgaccccgctgcaggccttcctgagccacgcc
tcgctggaggccggcgacacccaggcggcggagaacgaggacagcgtgcagctgatgacc
ctgcacagcgccaagggcctggagttcccccaggtgtttctggtgggcatggaggaaggc
ctgttcccgcacaagatgagcctggaggaacccggccgcttggaagaggaacggcgcctg
gcctacgtcggcatcacccgggccatgcacaagctggtgatcacctacgccgagacccgc
cgcctgtacggcagcgagacctacaacaaggtgtcgcgcttcgtccgcgagattccgccg
cagctgatccaggaagtgcgcctgtccggcagcgtcagccggcccttcgccacgccgggc
cgcggcacagctggcggcatgttcgccggcagcgccgtgccggacaccgccttcagcctc
ggccagcgggtgcaacacgcgctgttcggcgagggcaccatcctcaacttcgagggttcc
ggcgcccaggcccgagtccaggtgaatttcgaaaacgaaggcagcaagtggctgatgctc
agctacgccaagctgcaggcgctctga
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