Pseudomonas benzenivorans: SBP02_00555
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Entry
SBP02_00555 CDS
T10569
Symbol
tssC
Name
(GenBank) type VI secretion system contractile sheath large subunit
KO
K11900
type VI secretion system protein ImpC
Organism
pbez Pseudomonas benzenivorans
Pathway
pbez02025
Biofilm formation - Pseudomonas aeruginosa
Brite
KEGG Orthology (KO) [BR:
pbez00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02025 Biofilm formation - Pseudomonas aeruginosa
SBP02_00555 (tssC)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
pbez02044
]
SBP02_00555 (tssC)
Secretion system [BR:
pbez02044
]
Type VI secretion system
Imp/Vas secretion system core components
SBP02_00555 (tssC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VipB
VipB_2
BAMBI
Motif
Other DBs
NCBI-ProteinID:
WPC05273
UniProt:
A0ABZ0PVS1
LinkDB
All DBs
Position
complement(120042..121517)
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AA seq
491 aa
AA seq
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MSTSAAVESGHSAAELGILDRIIAETKLTPDDEAYDIAKRGVSAFIEELLKPQNENEPVK
KAMVDRMIAEIDAKLSRQMDEILHNAEFQALESSWRGLKLLVDRTNFRENIKLEILNASK
QDLLDDFEDSPEIVQSGLYKHIYTAEYGQFGGQPVGALIANYFFDPSAPDVKTLQYVASV
ASMSHAPFIAAAGPKFFGLESFTGLPDLKDLKDHFEGPQFTKWQSFREQEDARYVGLTVP
RFLLRNPYDPEDNPVKTFVYKENVAGSHEHYLWGNTAYTFASRLTDSFAKFRWCPNIIGP
QSGGAVEDLPLHHFESMGEIETKIPTEVLVSDRREYELAEEGFIALTMRKGSDNAAFFSA
NSAQKPKFFGISEEGKTAELNYKLGTQLPYMFIINRLAHYLKVLQREQIGAWKERTDLEL
ELNKWIRQFVADQENPSSEVRSRRPLRAAQVIVSDVEGEPGWYRVSLNVRPHFKYMGADF
TLSLVGKLDKE
NT seq
1476 nt
NT seq
+upstream
nt +downstream
nt
atgagcactagcgcagcagtagagagcggccacagcgccgccgaactcggcattctcgac
cgcatcatcgccgagaccaagctgaccccggacgacgaggcctacgacatcgccaagcgc
ggcgtgtcggccttcatcgaagaattgctgaaaccgcagaacgaaaacgagccggtgaag
aaggccatggtcgaccgcatgatcgcggagatcgacgccaagctcagccggcagatggac
gagatcctgcacaacgccgagttccaggccctggaatcctcctggcgcggcctcaagttg
ctggtggaccgcaccaacttccgcgagaacatcaagctggagatcctcaacgcctccaag
caggacctgctcgatgacttcgaggacagcccggagatcgtccagtccggcctgtacaag
cacatctacaccgccgagtacggccagttcggcggccagccggtcggcgcgctgatcgcc
aactacttcttcgaccccagcgccccggacgtcaagaccctgcagtacgtcgccagcgtc
gccagcatgtcccacgcgcccttcatcgccgcggccggtccgaagttcttcggcctggaa
agcttcaccggcctgccggacctgaaagacctgaaggaccacttcgaaggcccgcagttc
accaagtggcagagcttccgcgagcaggaagacgcccgctacgtcggcctcaccgtgccg
cgcttcctgctgcgcaacccctacgacccggaagacaacccggtgaagaccttcgtctac
aaggaaaacgtcgccggcagccacgagcactacctgtggggcaacaccgcctacaccttc
gccagccgcctgaccgacagcttcgccaagttccgctggtgcccgaacatcatcggcccg
cagagcggcggcgcggtggaagacctgccgctgcaccacttcgagagcatgggcgagatc
gagaccaagatccccaccgaggtgctggtctccgaccgtcgtgaatacgaactggccgaa
gaaggcttcatcgccctgaccatgcgcaagggcagcgacaacgccgcgttcttctccgcc
aactcggcgcagaagccgaagttcttcggcatcagcgaggaaggcaagaccgccgagctg
aactacaagctcggcacccagctgccctacatgttcatcatcaaccgcctggcccactac
ctgaaggtgctgcagcgcgagcagatcggtgcctggaaggagcgcaccgacctggaactg
gagctcaacaagtggatccgccagttcgtcgccgaccaggagaaccccagctccgaagtg
cgcagccgccgtccgctgcgcgccgcccaggtgatcgtcagcgatgtcgaaggcgagccg
ggctggtaccgcgtcagcctcaacgtgcgcccgcacttcaagtacatgggggccgatttc
accctgtccctggttggcaagctggacaaggagtaa
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