Pseudomonas benzenivorans: SBP02_01565
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Entry
SBP02_01565 CDS
T10569
Symbol
fdhF
Name
(GenBank) formate dehydrogenase subunit alpha
KO
K00123
formate dehydrogenase major subunit [EC:
1.17.1.9
]
Organism
pbez Pseudomonas benzenivorans
Pathway
pbez00630
Glyoxylate and dicarboxylate metabolism
pbez00680
Methane metabolism
pbez01100
Metabolic pathways
pbez01120
Microbial metabolism in diverse environments
pbez01200
Carbon metabolism
Brite
KEGG Orthology (KO) [BR:
pbez00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
SBP02_01565 (fdhF)
09102 Energy metabolism
00680 Methane metabolism
SBP02_01565 (fdhF)
Enzymes [BR:
pbez01000
]
1. Oxidoreductases
1.17 Acting on CH or CH2 groups
1.17.1 With NAD+ or NADP+ as acceptor
1.17.1.9 formate dehydrogenase
SBP02_01565 (fdhF)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Molybdopterin
Molydop_binding
Fer2_4
Molybdop_Fe4S4
NADH-G_4Fe-4S_3
Fer4_7
Fer4
Fer4_21
Fer4_10
Fer4_Nqo3
Fer4_9
Fer4_2
Fer4_6
Fer4_4
Fer4_16
Fer4_8
Fer4_15
Fer4_13
Fer4_NDSU1
Fer4_18
Motif
Other DBs
NCBI-ProteinID:
WPC05469
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Position
326375..329218
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AA seq
947 aa
AA seq
DB search
MALYRELDYGTPARTGAPVTVEIDGQPVTVPAGTSVMRAAQEAGIAVPKLCASDSLEPFG
SCRLCTVEIEGRRGYPASCTTPVEPGMKVRTQSPKLAELRRGTMELYISDHPLDCLTCSA
NGNCELQDMAGVVGLREVRYDPVKTHLAEAKDESNPYFSYDPAKCIVCNRCVRACEEVQG
TFALTIDGRGFDSRVAASQDEDFIDSECVSCGACVNACPTATLMEKSVIEMGQAERSVIT
TCAYCGVGCSFKAEVKGNEVVRMVPNKDGHANHGHACVKGRFAWGYATHPDRISTPMIRD
SIDQPWRSVGWDEAIGYAAERFKAIQAKYGQNAVGGLTSSRCTNEEAYLVQKLVRAAFGN
NNVDTCARVCHSPTGYGLKVTLGESAGTQDFDSVLAADVVLVIGANPTDGHPVFGSQLKR
RLREGARLIVADPRGIDLVRSPHIKADHHLQLRPGTNVALLNSLAHVIVTEGLVDEAFVA
ERCEAEAFEQWRSFVSEERNSPEALEATTGVPAAEVRAAARLYAIGGNAAIYYGLGVTEH
SQGSSTVMAIANLAMATGNIGRTGVGVNPLRGQNNVQGSCDMGSFPHELPGYRHVSDPVV
RPQFEEAWGVKLLDEPGLRIPNMLAAAHAGTFKGIYIQGEDPAQSDPDTQHVTDALKEME
CVVVQDLFLNETAKFAHVFLPGASFLEKNGTFTNAERRISPVRKVMPPLAGKEDWEVTVA
LSNALGYPMNYTHPSQIMDEIASLTPTFTGVSYAKLDRLGSIQWPCNDEAPDGTPIMHEE
QFVRGKGRFMVTEYIASDERTSRKRPLILTTGRILSQYNVGAQTRRTSNKAWHAEDILEL
HPVDAEDRGIQDGDWVGIDSRAGETVMRAKVTQRMQPGVVYTTFHHPESGANVITTDNSD
WATNCPEYKVTAVQVRKVEVPSKWQQEFEAFTKEQVEFLPQIKVTQL
NT seq
2844 nt
NT seq
+upstream
nt +downstream
nt
atggccctgtatcgtgaactcgactatggcacccccgcccgtaccggcgccccggtaacg
gtggaaatcgacggccagccggtcaccgtcccggccggcacctcggtgatgcgcgcggcc
caggaggccggcatcgccgtgcccaagctgtgcgccagcgacagcctcgagccgttcggc
tcctgccgcctgtgcaccgtggagatcgaaggccgccgcggctatccggcatcctgcacc
accccggtggagccgggcatgaaggtgcgcacgcagagcccgaagctggccgaactgcgc
cgcggcaccatggagctgtacatctccgaccaccccctggactgcctgacctgctcggcc
aacggcaattgcgagctgcaggacatggccggcgtggtcggcctgcgcgaggtgcgctac
gacccggtgaagacccacctggccgaggccaaggacgagtccaacccctatttcagctac
gacccggccaagtgcatcgtctgcaaccgctgcgtgcgcgcctgtgaggaggtgcagggc
accttcgccctgaccatcgacggccgcggcttcgactcgcgggtcgccgccagccaggac
gaagacttcatcgattcggagtgcgtgtcctgcggcgcctgcgtgaacgcctgcccgacc
gccaccctgatggagaagtcggtcatcgagatgggccaggccgagcgcagcgtgatcacc
acctgcgcctactgcggcgtcggctgttcgttcaaggccgaggtcaagggcaacgaagtg
gtgcgcatggtgccgaacaaggacggccacgccaaccacggccatgcctgcgtcaagggc
cgcttcgcctggggctacgccacccacccggatcgcatcagcacgccgatgatccgcgac
agcatcgaccagccctggcgcagcgtcggctgggacgaggccatcggctacgcggccgag
cgcttcaaggccatccaggccaagtacggacagaacgcggtcggcggcctgacctcctcg
cgctgcaccaacgaagaggcctacctggtgcagaagctggtgcgcgccgccttcggcaac
aacaacgtcgacacctgcgcccgggtctgccattcgccgaccggctacggcctcaaggtc
accctcggcgagtcggccgggacccaggacttcgactcggtgctggccgccgacgtggtg
ctggtgatcggtgccaaccccaccgacggccacccggtcttcggttcgcagctcaagcgc
cgcctgcgcgagggcgcccgcctgatcgtcgccgacccgcgcggcatcgacctggtgcgc
agcccgcacatcaaggccgaccaccacctgcagctgcgcccgggcaccaacgtcgccctg
ctcaacagcctggcccatgtgatcgtcaccgagggcctggtcgacgaggccttcgtcgcc
gagcgctgcgaggccgaggccttcgagcagtggcgcagcttcgtcagcgaagagcgcaac
agccccgaggcgctggaagccaccaccggcgtgccggccgccgaggtgcgtgcggccgcg
cggctgtatgccatcggcggcaatgcggcgatctactacggcctgggcgtgaccgagcac
agccagggctcctccaccgtgatggccatcgccaacctggccatggccaccggcaacatc
ggccgcaccggcgtcggcgtcaacccgctgcgcgggcagaacaacgtgcagggttcctgc
gacatgggctccttcccccatgagctgccgggctatcgccacgtctccgaccccgtggtg
cgtccgcagttcgaggaggcctggggcgtcaagctgctcgacgagccgggcctgcgcatc
cccaacatgctggccgccgcccatgccggtaccttcaagggcatctacatccagggcgag
gacccggcgcagtccgacccggacacccagcacgtcaccgacgcgctgaaggaaatggag
tgcgtggtggtgcaggacctgttcctcaacgaaaccgccaagttcgcccacgtgttcctg
ccgggcgcttccttcctggagaagaacggcaccttcaccaacgccgagcggcgcatctcg
ccggtgcgcaaggtgatgccgccgctggccggcaaggaagactgggaggtgacggtggcg
ttgtccaacgccctgggctacccgatgaactacacgcacccgtcgcagatcatggacgag
atcgccagcctgacgccgaccttcaccggggtcagctacgccaagctcgaccgcctgggc
agcatccagtggccgtgcaacgacgaggcgccggacggcacgccgatcatgcacgaggaa
cagttcgtgcgcggcaagggccgcttcatggtcaccgagtacatcgccagcgacgagcgc
acctcgcgcaagcgcccgctgatcctcaccaccggccgcatcctctcgcagtacaacgtc
ggtgcccagacccggcggacctcgaacaaggcctggcacgccgaggacatcctcgagctg
cacccggtggatgccgaggaccgcggtatccaggacggcgactgggtcggcatcgacagc
cgcgccggcgagacggtgatgcgcgccaaggtcacccagcgcatgcagccgggggtggtc
tacaccaccttccaccacccggaatccggtgccaacgtgatcaccaccgacaactccgac
tgggccaccaactgccccgagtacaaggtcacggcggtgcaggtgcgcaaggtcgaggtg
ccgtcgaagtggcagcaggagttcgaggctttcaccaaggagcaggtcgagttcctgccg
cagatcaaggtgactcagctctga
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