Pseudomonas benzenivorans: SBP02_01660
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Entry
SBP02_01660 CDS
T10569
Symbol
rfbB
Name
(GenBank) dTDP-glucose 4,6-dehydratase
KO
K01710
dTDP-glucose 4,6-dehydratase [EC:
4.2.1.46
]
Organism
pbez Pseudomonas benzenivorans
Pathway
pbez00521
Streptomycin biosynthesis
pbez00523
Polyketide sugar unit biosynthesis
pbez00525
Acarbose and validamycin biosynthesis
pbez00541
Biosynthesis of various nucleotide sugars
pbez01100
Metabolic pathways
pbez01110
Biosynthesis of secondary metabolites
pbez01250
Biosynthesis of nucleotide sugars
Module
pbez_M00793
dTDP-L-rhamnose biosynthesis, glucose-1P => dTDP-L-Rha
Brite
KEGG Orthology (KO) [BR:
pbez00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
SBP02_01660 (rfbB)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
SBP02_01660 (rfbB)
01055 Biosynthesis of vancomycin group antibiotics
SBP02_01660 (rfbB)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
SBP02_01660 (rfbB)
00525 Acarbose and validamycin biosynthesis
SBP02_01660 (rfbB)
Enzymes [BR:
pbez01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.46 dTDP-glucose 4,6-dehydratase
SBP02_01660 (rfbB)
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GFIT
Motif
Pfam:
GDP_Man_Dehyd
Epimerase
RmlD_sub_bind
3Beta_HSD
Polysacc_synt_2
NAD_binding_4
adh_short
KR
NAD_binding_10
Calici_MSP
Sacchrp_dh_NADP
Motif
Other DBs
NCBI-ProteinID:
WPC05488
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All DBs
Position
complement(348074..349129)
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AA seq
351 aa
AA seq
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MRILVTGGAGFIGSALIRHLLNETEHQLLNLDKLTYAGNLESLAGVADNPRYQFLQADIG
DQPKVAQALAEFQPEAIMHLAAESHVDRSIDGPAAFIQTNIVGTYSLLEATRAYWSALPA
ARKQAFRFHHISTDEVYGDLHGVDDLFSETTPYAPSSPYSASKAASDHLVRAWHRTYGLP
VLLTNCSNNYGPYHFPEKLIPLVILNALDGKPLPVYGNGQQVRDWLYVEDHARALLKVVS
EGRVGETYNIGGHNEQQNLHVVESICALLDELTPRRPGGSYRELISFVADRPGHDQRYAI
DASKIERELGWKPEETFASGLRKTVRWYLDNLDWCRRVQDGSYQRERLGAL
NT seq
1056 nt
NT seq
+upstream
nt +downstream
nt
atgcgaattctggtcaccggcggcgccggctttatcggctcggcactgatccgccacctg
ttgaacgaaaccgagcatcagctgctcaacttggacaagctgacctacgccggcaacctc
gagtcactggccggcgtcgcggacaatccgcgctaccagttcctccaggcggatatcggc
gatcagcccaaggtcgcccaggccctggccgagttccagcccgaggccatcatgcacctg
gccgccgagtcccacgtcgatcgctccatcgatggcccggccgcgttcatccaaaccaac
atagtcggcacctacagcctactggaggccacccgcgcctactggtcggcgttgccggcc
gcgcgcaaacaggcgtttcgcttccaccacatctccaccgacgaggtctacggcgacctg
cacggggtcgacgatctgttcagcgaaaccacgccctacgcccccagctccccctattcg
gcgagcaaggcagcctccgaccacctggtacgggcctggcaccgcacctacggcttgccg
gtgctgctcaccaactgctcgaacaactacggcccctatcactttccggagaaactgatc
ccgctggtgatcctcaacgccctggatggcaagccgctgccggtgtacggtaacggccag
caggtgcgcgactggctgtacgtcgaggaccacgcccgagccctgctcaaggtggtgagc
gagggccgggtcggcgagacctacaatatcggcgggcacaatgagcagcagaacctgcac
gtggtggaaagcatctgcgccctgctggacgaactgacgccgcgccggccaggcggctcc
taccgcgagctgatcagcttcgttgccgaccgccccgggcacgaccagcgctacgccata
gacgccagcaagatcgagcgcgaactgggctggaagcccgaggagaccttcgccagcggc
ctgcgcaagaccgtgcgctggtatctggacaacctcgactggtgccgccgcgtgcaggac
ggcagctatcaacgcgagcgcctcggcgccctgtaa
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