Pseudomonas benzenivorans: SBP02_03355
Help
Entry
SBP02_03355 CDS
T10569
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
pbez Pseudomonas benzenivorans
Brite
KEGG Orthology (KO) [BR:
pbez00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pbez03016
]
SBP02_03355 (truB)
Enzymes [BR:
pbez01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
SBP02_03355 (truB)
Transfer RNA biogenesis [BR:
pbez03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
SBP02_03355 (truB)
Prokaryotic type
SBP02_03355 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
PUA_3
Motif
Other DBs
NCBI-ProteinID:
WPC05812
LinkDB
All DBs
Position
720220..721137
Genome browser
AA seq
305 aa
AA seq
DB search
MAQVKRVRRQVNGIILLDKPRGFSSNAALQKVRWLLNAEKAGHTGSLDPLATGVLPLCFG
EATKFSQYLLDADKGYETLMQLGVTTSTGDAEGEVLERRAVTVGRADIEALLPQFRGEIR
QIPPMHSALKRDGQPLYKLARAGEVVEREPRSVTIARLELLDCEAEQARLAVDCSKGTYI
RTLVEDLGQLLGCGAHVAELRRTKAGPFALAQTVSLEALEQAHAEGGNEALDRFLLPVDS
GLQHWPLLQFSEHSAFYWLQGQPVRAPEAPKFGMVRVQDHNGRFIGIGEVSEDGRIAPRR
LIRSA
NT seq
918 nt
NT seq
+upstream
nt +downstream
nt
atggcccaggtaaaacgtgtacgtcgccaggtcaatggcatcatcctgctggacaagccg
cgcggcttcagctccaacgcggcgctgcagaaggtgcgctggttgctcaatgccgagaag
gccggacacaccggcagtctcgaccccctggccaccggcgtgttgccgctgtgcttcggc
gaggcgaccaagttctcccagtacctgctggatgccgacaagggctatgaaaccctgatg
cagctgggggtgaccaccagcaccggggatgccgagggggaagtgctcgaacgccgcgcg
gtgaccgtcggtcgtgccgatatcgaggcgctgttgccgcagtttcgcggcgagatcagg
cagataccgcccatgcactcggccctcaaacgcgacggccagccgctgtacaagctggcg
cgtgccggcgaagtagtggagcgcgagccgcgttctgttactattgcgcgcttggagttg
ctggactgcgaggcggagcaggcgcgcctggcggtggactgcagcaagggcacctatatt
cgcaccctggtcgaagacctcggtcagctgctcggctgcggcgcccatgtcgccgagttg
cgcaggaccaaggccggccccttcgccctggcgcagacggtcagcctggaagcgttggag
caggctcacgccgaaggcggcaacgaggccttggaccgcttcctgctgccggtggacagc
ggcttgcagcactggccgctgctgcagttctccgagcacagtgcgttctattggctgcag
gggcagccggtgcgcgcgcccgaggcgccgaagttcggcatggtgcgggtgcaagatcac
aacggccgcttcatcggtatcggtgaagtgagcgaagacgggcgcatcgcgccgcgtcgc
ttgattcggtcggcatga
DBGET
integrated database retrieval system
