Pseudomonas benzenivorans: SBP02_03710
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Entry
SBP02_03710 CDS
T10569
Name
(GenBank) exonuclease domain-containing protein
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
pbez Pseudomonas benzenivorans
Pathway
pbez03030
DNA replication
pbez03430
Mismatch repair
pbez03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pbez00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
SBP02_03710
03430 Mismatch repair
SBP02_03710
03440 Homologous recombination
SBP02_03710
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pbez03032
]
SBP02_03710
03400 DNA repair and recombination proteins [BR:
pbez03400
]
SBP02_03710
Enzymes [BR:
pbez01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
SBP02_03710
DNA replication proteins [BR:
pbez03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
SBP02_03710
DNA repair and recombination proteins [BR:
pbez03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
SBP02_03710
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_T
PAS_4
RNase_H_2
PAS_7
DEDDh_C
PAS_9
HisKA
DNA_pol_A_exo1
PAS
DUF533
FAA_hydrolase_N
T7SS_ESX_EspC
PAS_10
HpsJ
Motif
Other DBs
NCBI-ProteinID:
WPC05881
UniProt:
A0ABZ0PXN8
LinkDB
All DBs
Position
801037..803178
Genome browser
AA seq
713 aa
AA seq
DB search
MSPRLRFVAWLAGLVGLLMVLLGLVGAALWSDLEPAERAALAALVEGRGALLVVLGVLLL
VPFAVLLRLALQAYPEAAARLTEEVGIIHRVNPGHRIQPGGARAMRRLARALNAFAESHG
AVQEEVRQRIEEANAHLEQEKNRLAALMSELAQSVLVCNREGRILLYNSRASLLLEPSDT
QVGGAPVGLGRSIFAILDRRLIGHALERVRRRLEQRSPRPVATFVAARGTQLLRSQMVPL
QGGEGELIGFVLILEDITRAVQLNSRRDALMLQLTEGSRGALANIRAAAETLQQYPEMDA
ERRQRFGAVILDEAQRLSRQLEQSLARHADILRPQWPLEDMLAGDLLLALQRNFAAVLDV
TAHYAGNAPPLWLCLDSYSLVQAMTQLMGALASACAVREVELELAEEDGFARLGLCWQGA
PLEPELLHEWEERPFSLGGDDPGAATLREVLERHGGELWCRSDRATGASRLCLQLPIIEP
EPAEARAEPSQGRPVYYDFDLFSQPGQTPELDERPLVELAYTVFDTETTGLAPSEGDEII
SIGAVRIVNGHLLKQECFEQLIDPHRSIPRESQQVHGLTPELLTGQPSIAQVLPLFQRFA
EDTVLVAHNAAFDMRFLQLKEAQTGIRFIQPVLDTLLLSALAHPGHTADEHRLEQIAARL
GVQVIDRHTALGDAMVTGEVFLRLIPLLAERGIHTLRQAREASQKTIYAKLEY
NT seq
2142 nt
NT seq
+upstream
nt +downstream
nt
atgagcccacggctcaggttcgtcgcctggctggccggactcgttgggctgctcatggtc
ctgctcggcctggtcggggcggcgttgtggagcgacctggagccggccgagcgtgccgcg
ctggcggccctggtcgagggccggggcgccctgctggtggtgctcggcgtcctgctgctg
gtgcccttcgccgtgctcctgcgcctcgccctgcaggcctacccggaggcggcggcgcgc
ctgaccgaggaagtcggcatcatccaccgggtcaatcccggacaccgcatccagccgggc
ggcgcacgagcgatgcgtcggctggcgcgcgcgctgaatgccttcgccgagagccatggc
gccgtgcaggaggaggtcagacagcgcatcgaggaggccaacgcccatctggaacaggag
aagaaccgcctggcggcgctgatgtcggaactggcccagagcgtgctggtgtgcaaccgc
gaggggcgcatcctgctgtacaacagccgtgccagcctgttgctggaaccctccgacaca
caggtcggcggcgcaccggtcgggctggggcggtcgatcttcgccatcctcgaccggcgc
ctgatcgggcatgccctggagcgcgtgcgccggcgcctggaacagcgcagtccgcgaccc
gtggccactttcgtcgcggcccgcggcacccagctgttgcggtcccagatggtgccgctg
cagggcggggagggcgagttgatcggtttcgtgctgatcctcgaggacattacccgcgcg
gtgcaactcaacagccgccgcgatgccctgatgctgcagctcaccgagggcagccgcggt
gccctggccaatatccgtgccgccgccgaaaccctgcagcagtatcccgagatggatgcc
gagcgccgccagcgcttcggtgcggtgatcctcgacgaggcgcagcggctgtcccgacag
ttggagcagtcgctggcccggcacgccgatattctgcgaccgcaatggccgctggaggac
atgctggccggcgacctgctgctcgccctgcagcgcaactttgccgcggtgctggacgtc
accgcgcactacgcgggcaacgccccgccgctctggctgtgcctggacagctactccctg
gtgcaggccatgacccagctgatgggagccctggccagcgcctgtgcggtgcgcgaggtc
gaactggaactggccgaggaggacggtttcgcccgcctgggcctgtgctggcagggggct
cccctggagcctgagctgttgcacgagtgggaggaacggccgttcagcctgggcggcgac
gaccccggcgcggcgaccctgcgcgaggtgctggagcgccacggcggcgagctctggtgc
cggagcgatcgcgccaccggcgccagtcgtctgtgtctgcagttgccgatcatcgagccg
gagccggcggaggcccgtgcggagcccagccaggggcgtccggtgtactacgacttcgac
ttgttcagtcagccggggcagaccccggaactggacgagcgccccctggtcgagttggcc
tatacggtgttcgataccgagaccaccggcttggcgccttccgagggcgacgagatcatc
tcgatcggcgcggtgcgcatcgtcaacggccacctgctcaagcaggagtgtttcgagcag
ctgatcgacccacaccgttcgattccccgtgagtcccagcaggtgcacggtctgaccccg
gagctgctgaccggccagccgagcatcgcccaggtgctgccgctgttccagcgtttcgcc
gaggacaccgtgctggtcgcccacaatgcggcattcgacatgcgcttcctgcaactcaag
gaggcgcagaccggcatccgcttcatccagccggtgctcgacaccctgctgctgtcggcc
ctggcccatcccggccatacggccgacgagcatcgtctcgagcagatcgccgcccgcctg
ggggtgcaggtgatagatcggcataccgccctgggggatgccatggtcaccggggaggtg
tttctgcgtttgatcccgctgctcgccgagcgtggcatccacacgctgcggcaggcgcgc
gaagcctcgcagaagaccatctacgccaagctggagtattag
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