Pseudomonas benzenivorans: SBP02_04035
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Entry
SBP02_04035 CDS
T10569
Symbol
phrB
Name
(GenBank) deoxyribodipyrimidine photo-lyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
pbez Pseudomonas benzenivorans
Brite
KEGG Orthology (KO) [BR:
pbez00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pbez03400
]
SBP02_04035 (phrB)
Enzymes [BR:
pbez01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
SBP02_04035 (phrB)
DNA repair and recombination proteins [BR:
pbez03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
SBP02_04035 (phrB)
Prokaryotic type
SBP02_04035 (phrB)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
CAP59_mtransfer
Motif
Other DBs
NCBI-ProteinID:
WPC05930
LinkDB
All DBs
Position
complement(864811..866253)
Genome browser
AA seq
480 aa
AA seq
DB search
MRQLIWLRSDLRVRDNSALAAAMAAGPTVALYLLSPGQWRQHDDATCKVDFWLRNLTELS
SALGRLNVPLLIRQAPTWDEAPQVIAKLCRELRVAAVRVNEEYGINEQRRDQAVARRLDE
QGVAFHGYLDQLLFQPGSLLTQSGGYFKVYSQFRKLCYQRLHTALPPLLPTPAAQAPLAL
ASDTVPAAAAGFSPADETLRQLWPAGEASAHERLARFADEQIDYYQDARDIPAQPGTSQL
SAYLAAGVLSPRQCLHAALQVNRGEFDGGNNGVVTWINELLWREFYKHILVGYPRVSRHR
AFRPETEALPWRDAPDELAAWQQGRTGFPLIDAAMRQLHATGWMHNRLRMVVAMFLTKNL
LIDWRVGERYFMRQLIDGDLAANNGGWQWSASTGTDAVPYFRLFNPVSQSQRFDPQGRFI
RHWLPELAGLDDKAIHEPSRVRGGLFDALDYPRPIVDLGHSRERALAAFKNLPPLHQEAS
NT seq
1443 nt
NT seq
+upstream
nt +downstream
nt
atgcggcaactgatctggctgcgcagcgacctgcgcgtacgcgacaacagcgccctggcc
gccgccatggcggccgggccgaccgtggcgctctacctgctcagccccggccagtggcgc
cagcacgacgacgcaacctgcaaggtcgacttctggctgcgcaacctgaccgagctgtcc
agcgccctgggcaggctcaacgtgcccctgctgatccgccaggcgcctacctgggacgag
gccccgcaggtgattgccaagctgtgccgcgagttgcgggtcgccgccgtgcgggtcaac
gaggagtacgggatcaacgagcagcgccgcgaccaggccgtggcccggcgcctcgacgaa
cagggcgtggccttccacggttacctcgatcagctgttgttccagccgggcagcctgctg
acccagtccggtggctacttcaaggtctacagccagttccgcaagctctgctaccagcgc
ctgcacaccgccctgccgcccctgcttccgaccccggcggcgcaggcgcccctggcgctc
gcgagcgataccgtgcccgccgctgccgcgggtttcagcccggcggacgagacgctgcgc
cagctctggccggccggcgaggccagcgcccatgagcgcctggcacgcttcgccgacgag
cagatcgactactaccaggacgcccgcgacatccccgcccagcccggcaccagccagctg
tcggcctacctcgccgccggcgtgctgtcgccgcgccagtgcctgcacgccgccctgcag
gtcaatcggggcgagttcgatggcggcaacaacggcgtcgtcacctggatcaacgagctg
ctctggcgcgagttctacaagcacatcctggtcggctacccgcgcgtctcgcggcaccgc
gccttccgcccggagaccgaggcgctgccctggcgcgacgccccggacgagctggccgcc
tggcaacagggccgcaccggcttcccgctgatcgacgcggcgatgcgccagctgcacgcc
accggctggatgcacaaccgcctgcgcatggtcgtggccatgttcctgaccaagaaccta
ctgatcgactggcgcgtcggcgagcgctacttcatgcgccagctgatcgacggcgacctg
gcggccaacaacggcggctggcaatggagcgcctccaccggcaccgacgcggtgccctac
ttccgtctgttcaacccggtcagccagtcgcagcgcttcgacccccagggccgcttcatc
cgccactggctgccggagctggccgggctcgacgacaaggccatccatgagccgagcagg
gtgcgtggcgggctgttcgacgcgctcgactatccacggccgatcgtcgacctgggccac
agtcgcgaacgggccctggcggccttcaagaacctgccgccgctgcaccaggaggccagc
tga
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