Pseudomonas benzenivorans: SBP02_06645
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Entry
SBP02_06645 CDS
T10569
Name
(GenBank) DEAD/DEAH box helicase
KO
K05590
ATP-dependent RNA helicase SrmB [EC:
5.6.2.7
]
Organism
pbez Pseudomonas benzenivorans
Brite
Enzymes [BR:
pbez01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
SBP02_06645
Ribosome biogenesis [BR:
pbez03009
]
Prokaryotic type
rRNA helicases
SBP02_06645
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NCBI-ProteinID:
WPC06429
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Position
1439186..1440535
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AA seq
449 aa
AA seq
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MFSQFALHERLLKAVAELNFVEPTPVQVAAIPPALQGRDLRVIAQTGSGKTAAFVLPLLN
RLLGDGAAKPRLSLRAVILLPTRELAQQTLKEVERFAQFTFLKAGLITGGEDFKSQAAML
RRVDILIGTPGRLIEHANAGNLPLEEVEVLVLDEADRMLDMGFAEDVQRLAEACSGPHQT
LLFSATSGGSGLREMVAKVLKEPQHLQLNAVSQLNEGTRQQIITADHNYHKEQLVEWLLT
NETYDKAIVFTNTRVQADRLYGKLVAREFKTFVLHGEKDQKDRKLAIERLKQGAVKVLVA
TDVAARGLDVDGLDLVINFDMPRSGDEYVHRIGRTGRAGAEGLAISLICHTDWNLMSSIE
RYLKQRFERRSIKELKGSYQGPKNLKASGKAAGTKKKKTDAKGGKKAAKKPAAKTPSKRN
TINKPKGDAPALVSQDGLAPLKRRKPAAE
NT seq
1350 nt
NT seq
+upstream
nt +downstream
nt
gtgttttcccaattcgccctgcacgaacgcctgctgaaagccgtggccgagctgaacttt
gtcgagcccaccccggtgcaggtggcggccattccgccggcgctgcagggccgagacctg
cgggtgatcgcccagaccggcagcggcaagaccgccgccttcgttctgccgctgctcaac
cgcctgctcggcgacggcgcggccaagccgcggctgagcctgcgcgcggtgatcctgctg
ccgacccgcgagttggcccagcagaccctcaaggaggtcgagcgcttcgcccagttcacc
ttcctcaaggccggcctgattaccggcggcgaggacttcaagtcgcaggcggcgatgctg
cgccgggtggacatcctgatcggtaccccggggcggctgatcgagcacgccaacgccggc
aacctgccgctggaggaggtcgaggtactggtgctggacgaggccgaccgcatgctcgac
atgggcttcgccgaagacgtgcagcgcctggccgaggcctgcagcggcccgcaccagacc
ctgctgttctccgccaccagcggcggctcgggcctgcgcgagatggtcgccaaggtgctc
aaggaaccccagcatctgcagctcaacgcggtcagccagctcaacgagggtacccgccag
cagatcatcaccgccgaccacaactaccataaggaacagctggtcgagtggctgctgacc
aacgaaacctacgacaaggcgatcgtcttcaccaacacccgggtccaggccgaccgcctc
tacggcaagctggtggcgcgcgagttcaagaccttcgtgctgcacggcgagaaggaccag
aaggaccgcaagctggccatcgagcgcctcaagcagggtgcggtgaaggtgctggtggcc
accgacgtggcggcccgcggcctggacgtcgacggcctggacctggtgatcaacttcgac
atgccgcgctccggcgacgagtacgtgcaccgcatcggccgtaccggccgcgccggcgcc
gagggcctggcgatctcgctgatctgccacaccgactggaacctgatgtcgagcatcgag
cgctacctcaagcagcgcttcgaacggcgcagcatcaaggagctcaagggcagctaccag
gggccgaagaacctcaaggcctccggcaaggcggccggcaccaagaagaaaaagaccgac
gccaagggcggcaagaaggcggcgaagaagcccgcggccaagaccccgagcaagcgcaac
acgatcaacaagccgaagggcgacgccccggcgctggtcagccaggacggcctggcgccg
ctcaagcgccgtaagccggcggccgagtaa
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