Pseudomonas benzenivorans: SBP02_09365
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Entry
SBP02_09365 CDS
T10569
Name
(GenBank) HU family DNA-binding protein
KO
K03530
DNA-binding protein HU-beta
Organism
pbez Pseudomonas benzenivorans
Brite
KEGG Orthology (KO) [BR:
pbez00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pbez03032
]
SBP02_09365
03036 Chromosome and associated proteins [BR:
pbez03036
]
SBP02_09365
03400 DNA repair and recombination proteins [BR:
pbez03400
]
SBP02_09365
DNA replication proteins [BR:
pbez03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
SBP02_09365
Chromosome and associated proteins [BR:
pbez03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
SBP02_09365
DNA repair and recombination proteins [BR:
pbez03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
SBP02_09365
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
HU-CCDC81_euk_2
SSPI
HTH_IclR
TrmB
HTH_30
HTH_20
HU-DNA_bdg
HTH_5
HTH_24
GntR
HTH_23
Fe_dep_repress
HTH_Cmi2_C
Motif
Other DBs
NCBI-ProteinID:
WPC06938
LinkDB
All DBs
Position
complement(2064649..2064927)
Genome browser
AA seq
92 aa
AA seq
DB search
MAMTKDQLISDIAEAIDIPKSTVRAALEQLSEIVSDALENGEEITLPGIGKLKVGERPAR
TGRNPQTGQAIEIAAKKVVKYVPAKALSDAIN
NT seq
279 nt
NT seq
+upstream
nt +downstream
nt
atggccatgaccaaagaccagttgatcagcgatatcgccgaagccatcgacatcccgaag
agcaccgtgcgtgcagccctcgaacagctcagcgagatcgtcagcgatgccctggaaaat
ggcgaggaaatcaccctgcccggcatcggcaagttgaaagtcggcgagcgcccggcccgt
accggccgcaacccgcagaccggccaggcgatcgagatcgccgcgaagaaggtggtcaag
tatgtgccggccaaggcactgagcgacgcgatcaactaa
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