Pseudomonas benzenivorans: SBP02_10520
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Entry
SBP02_10520 CDS
T10569
Symbol
icd
Name
(GenBank) NADP-dependent isocitrate dehydrogenase
KO
K00031
isocitrate dehydrogenase [EC:
1.1.1.42
]
Organism
pbez Pseudomonas benzenivorans
Pathway
pbez00020
Citrate cycle (TCA cycle)
pbez00480
Glutathione metabolism
pbez00720
Other carbon fixation pathways
pbez01100
Metabolic pathways
pbez01110
Biosynthesis of secondary metabolites
pbez01120
Microbial metabolism in diverse environments
pbez01200
Carbon metabolism
pbez01210
2-Oxocarboxylic acid metabolism
pbez01230
Biosynthesis of amino acids
pbez04146
Peroxisome
Module
pbez_M00009
Citrate cycle (TCA cycle, Krebs cycle)
pbez_M00010
Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate
Brite
KEGG Orthology (KO) [BR:
pbez00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
SBP02_10520 (icd)
09102 Energy metabolism
00720 Other carbon fixation pathways
SBP02_10520 (icd)
09106 Metabolism of other amino acids
00480 Glutathione metabolism
SBP02_10520 (icd)
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
SBP02_10520 (icd)
Enzymes [BR:
pbez01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.42 isocitrate dehydrogenase (NADP+)
SBP02_10520 (icd)
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GFIT
Motif
Pfam:
Iso_dh
Motif
Other DBs
NCBI-ProteinID:
WPC03232
LinkDB
All DBs
Position
complement(2324618..2325874)
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AA seq
418 aa
AA seq
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MGYQKIQVPATGDKITVNADMSLNVPNNPIIPFIEGDGIGVDISPVMIKVVDAAVEKAYG
GERKISWMEVYAGEKATQVYDQDTWLPKETLEAVRDYVVSIKGPLTTPVGGGIRSLNVAL
RQELDLYVCQRPVRWFEGVPSPVKKPGDVDMVIFRENSEDIYAGVEWKAGSPEAEKVIKF
LTEEMGVKKIRFTDMCGIGIKPVSEAGTKRLVRKALQYAVDNDRGSVTLVHKGNIMKFTE
GAFKEWGYEIAQQEFGAELLDGGPWMQFKNPKTGKNIVVKDVIADAMLQQILLRPAEYDV
IATLNLNGDYLSDALAAEVGGIGIAPGANLSDSVAMFEATHGTAPKYAGQDKVNPGSVIL
SAEMMLRHMGWSEAADLIIKGTNGAIAAKTVTYDFERLMDGAKLMSCSQFGDAMIAHM
NT seq
1257 nt
NT seq
+upstream
nt +downstream
nt
atgggataccaaaagatccaggtgccagcaaccggtgacaaaatcaccgtcaatgccgac
atgtcccttaacgttccgaacaacccgatcatcccgttcatcgagggcgatggtatcggt
gtcgatatcagcccggtgatgatcaaggtcgtcgatgccgccgtggagaaggcctacggt
ggcgagcgcaagatttcctggatggaagtctatgccggcgagaaggccactcaggtctac
gaccaggacacctggctgccgaaagagaccctggaagccgtgcgcgactatgtcgtttcg
atcaaggggccgctgaccacgccggtcggtggtggcatccgctcgctgaacgtggcgttg
cgccaggagctggacctctatgtctgccagcgtccggtacgctggttcgagggtgtgccg
agcccggtcaagaaaccgggtgatgtcgacatggtgatcttccgcgagaactccgaagac
atttacgccggcgtcgagtggaaggccggctctcccgaggccgagaaggtcatcaagttc
ctcaccgaagagatgggcgtcaagaagatccgcttcaccgacatgtgcggcatcggcatc
aagccggtttccgaggcgggcaccaagcgcctggtgcgcaaggcgctgcagtacgccgtc
gacaacgatcgtggctcggtgaccctcgtgcacaagggcaacatcatgaaattcaccgag
ggggccttcaaggagtggggctacgagatcgcccagcaggagttcggtgccgaactgctc
gatggcggcccttggatgcaattcaagaatccgaagaccggcaagaacatcgtggtcaag
gatgtgattgccgacgccatgctgcagcagatcctgctgcgtccggccgagtacgatgtg
atcgccaccctgaacctcaatggtgactacctgtccgacgccctggctgctgaagtcggc
ggtattggtatcgcgcccggcgcgaacctgtccgacagcgtggccatgttcgaggccact
catggcaccgcaccgaagtacgccggtcaggacaaggtcaatccagggtcggtcatcctc
tcggccgagatgatgctgcgccacatgggctggagcgaggctgccgacctcatcatcaag
ggcaccaacggcgccatcgccgcgaagaccgtgacctatgacttcgagcgcctgatggac
ggcgccaagctgatgtcttgctcgcagttcggcgatgccatgatcgctcacatgtaa
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