Pseudomonas benzenivorans: SBP02_11215
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Entry
SBP02_11215 CDS
T10569
Symbol
nirB
Name
(GenBank) nitrite reductase large subunit NirB
KO
K26139
nitrite reductase [NAD(P)H] large subunit [EC:
1.7.1.4
]
Organism
pbez Pseudomonas benzenivorans
Pathway
pbez00910
Nitrogen metabolism
pbez01100
Metabolic pathways
pbez01120
Microbial metabolism in diverse environments
pbez01310
Nitrogen cycle
Module
pbez_M00531
Assimilatory nitrate reduction, nitrate => ammonia
pbez_M00615
Nitrate assimilation
Brite
KEGG Orthology (KO) [BR:
pbez00001
]
09100 Metabolism
09102 Energy metabolism
00910 Nitrogen metabolism
SBP02_11215 (nirB)
Enzymes [BR:
pbez01000
]
1. Oxidoreductases
1.7 Acting on other nitrogenous compounds as donors
1.7.1 With NAD+ or NADP+ as acceptor
1.7.1.4 nitrite reductase [NAD(P)H]
SBP02_11215 (nirB)
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Gene cluster
GFIT
Motif
Pfam:
Pyr_redox_2
NIR_SIR
Fer2_BFD
Pyr_redox
Rubredoxin_C
NIR_SIR_ferr
Pyr_redox_3
DAO
Amino_oxidase
NAD_binding_7
AlaDh_PNT_C
NAD_binding_8
DUF4070
FAD_binding_2
3HCDH_N
FAD_binding_3
Trp_halogenase
Motif
Other DBs
NCBI-ProteinID:
WPC03364
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All DBs
Position
2486954..2489410
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AA seq
818 aa
AA seq
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MKKLKLVMIGNGMAGVRTLEELLKLAPDLYDITVFGAEPHPNYNRILLSPVLAGEQSFEE
IVLNDLAWYADNGIDLRLGRKVVEIDRKRRLVIAEDGSEAEYDRLLIATGSNPFILPIPG
KDLDGVIGYRDIADTQTMMDTAKTHKHAVVIGGGLLGLEAANGLKLRGMDVTVVHIGDWL
LERQLDRTAGDLLQKSLEDRGLKFLLPKHTAELLDNGEGRVCAVKFKDGEVIPADLVVMA
AGIRPNTELAEKAGIACNRGILVDDTLQTFDPRVYAIGECASHRGIAYGLVAPLFEQAKV
CANHLAQLGFSRYQGSVTSTKLKVTGIDLFSAGEFMGAEGTETITLSDPIGGVYKKLVIK
DDVLVGACLYGDTADGGWYFRQIRENHNVSEIRDHLMFGENAIGDVGHQGADKTANMPDS
MEVCGCNGVCKGTIVKAIQENGLFSVDEVKKHTKAASSCGSCAGLVEQILISTVGGAADV
KPKSEKAICGCSDFNHGQIRKTIREQHLTSLSQAMAFMNWSTPNGCATCRPALNYYLIST
WPGEAKDDPQSRLINERAHANIQKDGTYSVVPRMWGGVTNPSELRRIADVADKYQVPMVK
VTGGQRIDLLGIKKEDLPAVWKELDMPSGHAYGKSIRTVKTCVGSEFCRFGTQNSTQLGI
ELEHDLFNMWSPHKVKLAVSGCPRNCAEAGIKDVGIIGVDSGWEMYIGGNGGIKTEVAEF
FVKLKTAEEVREYNGAFLQLYREEAFYLERTVHYLQRVGMEHIKKAVLEDEGNRKALNAR
LQYALSFEQDPWKERIETPNLKKEFDRINVVQLEEASV
NT seq
2457 nt
NT seq
+upstream
nt +downstream
nt
atgaagaaactcaaactggtaatgatcggtaacggcatggccggagtgcggacgctcgag
gagctgctcaagctcgctcccgacctctacgacatcaccgtgttcggtgccgaaccccac
ccgaactacaaccgcatcctgctctcgccggtgctggccggcgagcagagcttcgaggag
atcgtcctcaacgatctggcctggtatgccgacaacggcatcgatctgcgcctggggcgc
aaggtcgtggagatcgaccgcaagcgccgcctggtcatcgccgaggacggcagcgaagcc
gagtacgaccgcctgctcatcgccaccggctccaaccccttcatcctgccgatccccggc
aaggacctggacggggtgatcggctaccgcgacatcgccgacacccagaccatgatggac
accgccaagacccacaagcacgcggtggtgatcggcggcggcctgctcggcctggaagcg
gccaacggcctcaagctgcgtggcatggacgtcaccgtggtgcatatcggcgactggctg
ctggagcgccagctcgaccgcaccgccggcgacctgctgcagaagtccctggaggaccgc
ggcctgaagttcctcctgcccaagcacaccgccgagctgctggacaacggcgaaggccgg
gtctgcgcggtgaagttcaaggatggcgaggtgatccccgccgacctggtggtgatggcc
gccggcatccgccccaacaccgagctggcggagaaggccgggatcgcctgcaaccgcggc
atcctggtcgacgacaccctgcagaccttcgacccgcgggtctacgccatcggcgaatgt
gccagccaccgtggcatcgcctacggcctggtggcaccgctgttcgagcaggccaaggtc
tgcgccaaccacctggcccagctgggtttctcccgctaccagggctcggtgacctcgacc
aagctcaaggtcaccggcatcgacctgttctccgccggcgaatttatgggtgccgagggc
accgagaccatcaccctgtccgaccccatcggcggcgtgtacaagaagctggtgatcaag
gacgacgtgctggtcggcgcctgcctgtacggcgacaccgccgacggcggctggtacttc
cggcagatccgcgagaaccacaacgtcagcgagatccgcgaccacctgatgttcggcgag
aacgccatcggcgacgtcggccaccagggcgccgacaagaccgccaacatgcccgacagc
atggaggtgtgcggctgcaacggcgtgtgcaagggcactatcgtcaaggccatccaggag
aacggcctgttctcggtcgacgaggtcaagaaacacaccaaggccgccagctcctgcggc
tcctgcgccggactggtcgagcagatcctgatcagcacggtcggcggcgccgccgacgtc
aaacccaagagcgagaaggccatctgcggctgcagcgacttcaaccacggacagatccgc
aagaccatccgcgagcagcacctgaccagcctcagccaggccatggccttcatgaactgg
agcacgcccaacggctgcgccacctgccgcccggcgctgaactattacctgatctccacc
tggccgggcgaggccaaggacgacccgcagtcgcgcctgatcaacgagcgcgcccacgcc
aacatccagaaggacggcacctactcggtggtgccgcgcatgtggggcggggtcaccaac
ccctccgagctgcgccgcatcgccgacgtggccgacaagtaccaggtgcccatggtcaag
gtcaccggcggccagcgcatcgacctgctgggcatcaagaaggaagacctgccggcggtg
tggaaggaactggacatgccctccggccacgcctacggcaagtccatccgcaccgtgaag
acctgcgtgggcagcgagttctgccgcttcggcacacagaactcgacccagctgggcatc
gagctggagcacgacctgttcaacatgtggtcgccgcacaaggtcaagctggcggtctcc
ggctgcccgcgcaactgcgccgaggccggcatcaaggacgtcggcatcatcggcgtggat
tcgggctgggagatgtacatcggcggcaacggcggcatcaagaccgaggtcgcggagttc
ttcgtcaagctcaagaccgccgaggaggtgcgcgagtacaacggcgccttcctccagctc
tatcgcgaggaagccttctacctggagcgcaccgtgcactacctgcagcgcgtgggcatg
gagcacatcaagaaggccgtgctggaggacgaaggcaaccgcaaggcgctcaatgcccgc
ctgcaatacgcactgtccttcgagcaggacccgtggaaggagcgcatcgaaaccccgaac
ctgaagaaagagttcgaccgcatcaacgtcgtgcagctcgaggaggcctccgtatga
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