Pseudomonas benzenivorans: SBP02_12455
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Entry
SBP02_12455 CDS
T10569
Name
(GenBank) DEAD/DEAH box helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
pbez Pseudomonas benzenivorans
Pathway
pbez03018
RNA degradation
Brite
Enzymes [BR:
pbez01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
SBP02_12455
Messenger RNA biogenesis [BR:
pbez03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
SBP02_12455
Ribosome biogenesis [BR:
pbez03009
]
Prokaryotic type
rRNA helicases
SBP02_12455
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Ortholog
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Gene cluster
GFIT
Other DBs
NCBI-ProteinID:
WPC03591
LinkDB
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Position
complement(2727213..2728865)
Genome browser
AA seq
550 aa
AA seq
DB search
MTQEIGGFAALGLHPSILSALIAVGYEEPSPIQSQAIPVILGGHDMIGQAQTGTGKTAAF
ALPLLSKIDPSKREPQALILAPTRELALQVATAFETYSKQMPGLNVVAVYGGAPMGPQLK
AIRQGAQVIVATPGRLVDHLRRDEKVLSTIQYLVLDEADEMLKLGFMDDLEVIFQAMPES
RQSVLFSATLPHSIRAIAEKHLRNPQHIKIAAKTQTVARIEQAHLMVHADQKHAAVLRLL
EVEEFDALIAFVRTKQATLDLAAALEAKGYKAAALNGDIAQNQRERVIDSLKDGRLDIVV
ATDVAARGLDVPRITHVMNVDMPYDPESYVHRIGRTGRAGRDGRALLLVTPRERRMLQVI
ERVTGQKVGEVKLPNSQQVLDARIKKLTASLAPLVADAEASHGELLDRLTAEIACNPRAL
AAALLRKATNGQALTLAEVEREQPLVPSGAPRERSERGDSRERRAPMPLAEGRARCRTAL
GARDGIAAKNLLGAILNEGGLAREAIGRIQVRESFSLVELPEEGLERLLGKLKDTRVGGK
PLKLRRYRED
NT seq
1653 nt
NT seq
+upstream
nt +downstream
nt
atgacccaggaaatcggcggcttcgccgcgctcggacttcatcccagtattctctccgcg
ctgatcgcagtcggctacgaagagccgtcccccatccagtcccaggccattccggtgatc
ctcggcggccacgacatgatcggccaggcccagaccggcaccggcaagaccgcggccttc
gccctgccgctgctgtcgaagatcgacccgagcaagcgcgagccccaggcgctgatcctg
gcgccgacccgcgagctggccctgcaggtggccaccgccttcgagacctactccaagcag
atgcccggcctcaacgtagtggccgtgtacggcggtgcgcccatgggcccgcagctcaag
gccatccgccagggcgcccaggtgatcgtcgccaccccgggtcgtctggtcgaccacctg
cgtcgcgacgagaaggtgctgtcgaccattcaatacctggtcctcgacgaagcggacgag
atgctcaagctgggcttcatggacgacctggaagtgatcttccaggccatgccggaaagt
cgtcagagcgtgctgttctccgcgaccctgccgcactcgatccgcgccatcgccgagaag
cacctgcgtaacccgcagcacatcaagatcgccgccaagacccagaccgtcgcgcgcatc
gagcaggcccacctgatggtgcatgccgaccagaagcacgccgcggtgctgcgcctgctg
gaggtcgaggagttcgatgcgctgatcgccttcgtgcgcaccaagcaggccaccctggac
ctggcggctgccctggaagccaagggctacaaggccgctgcgctgaacggcgacatcgcc
cagaaccagcgcgagcgggtgatcgactcgctcaaggacggccgcctggacatcgtcgtc
gccaccgacgtcgccgcccgaggcctggacgtgccgcgcatcacccatgtgatgaacgtc
gacatgccctacgatccggagtcctacgtgcaccgcatcggtcgtaccggccgcgccggt
cgcgatggccgggccctgctgctggtcaccccgcgcgagcgccgcatgctgcaggtgatc
gagcgcgtcaccgggcagaaggtcggcgaggtcaagctgcccaactcccaacaggtgctg
gatgcgcggatcaagaagctcaccgccagcctggcgccgctggtggccgatgccgaggcc
agccatggcgagctgctcgatcgcctgaccgccgagatcgcctgcaacccgcgcgccctg
gccgcggcgctgctgcgcaaggccaccaatggccaggcgctgaccctggccgaggtcgag
cgcgagcagcccctggtgccgagcggcgccccgcgcgagcgctccgaacgtggcgacagc
cgcgagcgtcgcgcgccgatgccgctggccgagggccgtgcccgttgccgtaccgccctg
ggggcgcgtgacggtatcgcggcgaaaaacctgctgggcgccatcctcaacgagggcggc
ctggcccgcgaagccatcggtcgcatccaggtgcgcgagagcttcagcctggtcgagctg
ccggaggagggcctggagcgcctgctgggcaagctcaaggacacccgcgtcggtggtaag
ccgctcaagctgcgccgctaccgcgaggactga
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