Pseudomonas benzenivorans: SBP02_12910
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Entry
SBP02_12910 CDS
T10569
Symbol
fadB
Name
(GenBank) fatty acid oxidation complex subunit alpha FadB
KO
K01825
3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:
1.1.1.35
4.2.1.17
5.1.2.3
5.3.3.8
]
Organism
pbez Pseudomonas benzenivorans
Pathway
pbez00071
Fatty acid degradation
pbez00280
Valine, leucine and isoleucine degradation
pbez00310
Lysine degradation
pbez00362
Benzoate degradation
pbez00380
Tryptophan metabolism
pbez00410
beta-Alanine metabolism
pbez00640
Propanoate metabolism
pbez00650
Butanoate metabolism
pbez00907
Pinene, camphor and geraniol degradation
pbez00930
Caprolactam degradation
pbez01100
Metabolic pathways
pbez01110
Biosynthesis of secondary metabolites
pbez01120
Microbial metabolism in diverse environments
pbez01200
Carbon metabolism
pbez01212
Fatty acid metabolism
Module
pbez_M00087
beta-Oxidation
Brite
KEGG Orthology (KO) [BR:
pbez00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00640 Propanoate metabolism
SBP02_12910 (fadB)
00650 Butanoate metabolism
SBP02_12910 (fadB)
09103 Lipid metabolism
00071 Fatty acid degradation
SBP02_12910 (fadB)
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
SBP02_12910 (fadB)
00310 Lysine degradation
SBP02_12910 (fadB)
00380 Tryptophan metabolism
SBP02_12910 (fadB)
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
SBP02_12910 (fadB)
09109 Metabolism of terpenoids and polyketides
00907 Pinene, camphor and geraniol degradation
SBP02_12910 (fadB)
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
SBP02_12910 (fadB)
00930 Caprolactam degradation
SBP02_12910 (fadB)
Enzymes [BR:
pbez01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.35 3-hydroxyacyl-CoA dehydrogenase
SBP02_12910 (fadB)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.17 enoyl-CoA hydratase
SBP02_12910 (fadB)
5. Isomerases
5.1 Racemases and epimerases
5.1.2 Acting on hydroxy acids and derivatives
5.1.2.3 3-hydroxybutyryl-CoA epimerase
SBP02_12910 (fadB)
5.3 Intramolecular oxidoreductases
5.3.3 Transposing C=C bonds
5.3.3.8 Delta3-Delta2-enoyl-CoA isomerase
SBP02_12910 (fadB)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
3HCDH_N
ECH_1
3HCDH
ECH_2
Motif
Other DBs
NCBI-ProteinID:
WPC03680
UniProt:
A0ABZ0PSW8
LinkDB
All DBs
Position
complement(2818690..2820837)
Genome browser
AA seq
715 aa
AA seq
DB search
MIYEGKAITVKALESGIVELKFDLKGESVNKFNRLTLNELRQAVDAIKADDSIKGVIVSS
GKDVFIVGADITEFVDNFKLPDEELVAGNLEANKIFSDFEDLGVPTVAVINGIALGGGFE
MCLAADYRVMADSAKVGLPEVKLGIYPGFGGTVRLPRLIGTDNAVEWIAAGKENRADDAL
KVGAVDVVVAADKLQAAALDLVKRAISGELDHKAKRQPKLDKLKLNAIEQMMCFETAKGF
VAGQAGPNYPAPVEAIKTIQKAANFTRDKALEVEAAGFVKLAKTSVAESLIGLFLNDQEL
KKKAKHHDEIARDVNLAAVLGAGIMGGGIAYQSAVKGTPILMKDIREEGIQMGLNEASKL
LGKRVEKGRLTPAKMAEALNAIRPTMSYGDFGNVDIVVEAVVENPKVKQAVLAEVEAAVG
ENAILASNTSTISISLLAKALKRPENFVGMHFFNPVHMMPLVEVIRGEKSSEVAVATTVA
YAKKMGKTPVVVNDCPGFLVNRVLFPYFGGFSKLLELGVDFVRIDKVMEKFGWPMGPAYL
SDVVGIDTGHHGRDVMAEGFPDRMAVEGRTAVDVMYEANRLGQKNGKGFYAYETDKRGKP
KKVIDPQAYELLKSIVREQRELSDEDIINFMMIPLCMETVRCLEDGIVETAAEADMGLIY
GIGFPPFRGGALRYIDSIGVAEFVALADKYADLGALYHPTAKLREMAANGQKFFG
NT seq
2148 nt
NT seq
+upstream
nt +downstream
nt
atgatttacgaaggtaaagccatcacggttaaggctcttgagagtggcatcgtcgaactg
aaattcgacctcaagggtgaatccgtcaacaagttcaaccgtctaaccctgaacgaactg
cgtcaggcggttgatgcgatcaaggccgatgactcgatcaagggcgtgattgtcagcagt
ggcaaggacgtgttcatcgtcggcgccgatatcaccgaattcgtcgacaacttcaagttg
cctgacgaggaactggtggccggcaacctggaagccaacaagatcttcagcgacttcgaa
gacctcggcgtgccgaccgtcgcggtcatcaacggcatcgccctgggcggcggcttcgag
atgtgcctggcggcggattaccgcgtcatggccgacagcgccaaggtaggcctgccggaa
gtcaagctgggcatctacccgggcttcggcggcaccgtgcgcctgccgcgcctgatcggt
accgacaatgcggtggagtggatcgccgccggcaaggaaaatcgcgcagacgacgccctg
aaagtaggggccgtcgatgtcgtggtcgccgccgacaagctccaggcagcagccctggat
ctggtcaagcgcgccatctccggtgagctggaccacaaggccaagcgtcagcctaagctg
gacaagctcaagctcaacgccatcgagcagatgatgtgcttcgagaccgccaagggcttc
gtcgcagggcaagccggcccgaactacccggcgccggtcgaggcgatcaagaccatccag
aaggccgccaacttcacccgcgacaaggccctggaagtcgaggccgccggcttcgtcaag
ctggccaagacctcggtggccgagagcctgatcggcctgttcctcaacgatcaggaactg
aagaagaaggccaagcaccacgacgagatcgcccgcgacgtgaatctggctgccgtgctc
ggcgccggcatcatgggcggcggtatcgcctaccagtcggcggtcaaaggcacgccgatc
ctgatgaaggatatccgcgaagagggtatccagatgggcctgaacgaggcctccaagctg
ctcggcaagcgcgtcgagaagggtcgcctgaccccggcgaagatggccgaggcgctcaac
gccattcgcccgaccatgtcctacggtgatttcggcaacgtcgacatcgtcgtcgaagcc
gtggtcgagaaccccaaggtcaagcaggccgtgctggccgaggtggaagctgccgtcggt
gagaatgcgattctcgcctccaacacctcgaccatctccatcagcttgctggccaaggcc
ctcaaacgtccggaaaacttcgtcggcatgcacttcttcaacccggtgcacatgatgccg
ctggtcgaagtcatccgtggtgagaagtccagcgaagtggccgtggccaccaccgtggcc
tacgccaagaagatgggcaagaccccggtcgtggtcaacgactgcccgggctttttggtc
aaccgcgtgctgttcccgtacttcggcggcttctccaagctgctcgagctgggcgtcgac
ttcgtgcgcatcgacaaggtcatggagaagttcggctggcccatgggcccggcctacctg
tccgacgtggtcggcatcgacaccggccaccacggccgcgacgtgatggccgaaggcttc
ccggatcgcatggcggtcgaaggtcgcaccgcggtcgacgtgatgtacgaagccaaccgt
ctgggccagaagaacggcaagggcttctatgcctacgaaaccgacaagcgcggcaagccg
aagaaggtcatcgatccgcaggcatacgaactgctcaagtcgatcgtgcgcgagcagcgt
gaactgagcgacgaggacatcatcaacttcatgatgatcccgctgtgcatggaaactgtt
cgctgcctggaagacggcatcgtcgagaccgccgcagaggccgatatgggcctgatctac
ggcatcggcttcccgcccttccgtgggggtgcgctgcgctacatcgacagcatcggtgtg
gccgagttcgtcgccctggccgacaagtacgccgatctgggcgcgttgtaccacccgacc
gccaagcttcgcgagatggccgccaacggccagaagttcttcggttaa
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