Pseudomonas benzenivorans: SBP02_14545
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Entry
SBP02_14545 CDS
T10569
Symbol
rapA
Name
(GenBank) RNA polymerase-associated protein RapA
KO
K03580
ATP-dependent helicase HepA [EC:5.6.2.-]
Organism
pbez Pseudomonas benzenivorans
Brite
KEGG Orthology (KO) [BR:
pbez00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pbez03021
]
SBP02_14545 (rapA)
Transcription machinery [BR:
pbez03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
RNA polymerase-associated proteins
SBP02_14545 (rapA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RapA_C
Tudor_1_RapA
Tudor_RapA
Helicase_C
SNF2-rel_dom
ResIII
DEAD
Cas3-like_C_2
Motif
Other DBs
NCBI-ProteinID:
WPC03989
UniProt:
A0ABZ0PS51
LinkDB
All DBs
Position
3154271..3157114
Genome browser
AA seq
947 aa
AA seq
DB search
MAQYEPGQRWISDSEAELGLGTILMQDGRMLTVLYPATGETRQYAARNAPLTRVRFAPGD
EITHFEGWKLTVQEVEDIDGLLVYHGLNGSHESISLPETQLSNFIQFRLASDRLFAGQID
PLPWFALRYRTLEFTSKQLQSPLWGLGGARAQPIAHQLHIAREVADRIAPRVLLADEVGL
GKTIEAGLVIHRQLLTGRASRVLILVPENLQHQWLVEMRRRFNLEVALFDAERFIESDAS
NPFEDAQLALVALEWLREDERAQDALFAAGWDLLVVDEAHHLVWHPEHASPEYVLVEQLA
GVIPGVLLLTATPEQLGQDSHFARLRLLDPHRFHDLEAFRAESAHYRPVAEAVQELLDQG
QLSTRAHRTIHDFLGQEGEGLLAAVNAGDQDAAARLVRELLDRHGTGRLLFRNTRAAVQG
FPERELHPYPLPNPDEYMELPIGEHPDLYPEVSYQAQSELDDEQRWWRFDPRVEWLIDTL
KMLKKFKVLVICAHAETAMDLEDALRVRKGIPATVFHEGMSILERDRAAAYFADEEFGAQ
VLICSEIGSEGRNFQFAHHLVLFDLPAHPDLLEQRIGRLDRIGQKHRIQLHVPYLENSPQ
ERLFQWYHQGLNAFLATCPTGNALQQQFGTRLLPLLEGGDDDQWQQLVDEARAERERLEG
ELHAGRDRLLELNSGGAGEGEALVEAILEQDDQFALPIYMEALFDAFGIDSEDHSENALI
LRPSEKMLDASFPLGSDEGVTITYDRNQALAREDMQFLTWEHPMVQGGMDLVRSGSMGNT
GVALIKNKALKPGTVLLELLYVSEVVAPRNLQLGRYLPPAALRCLLDANGNDLAGKVAFE
TLNDQLESVPRASANKFVQAQRDALTPLINGGDDKIAPRHAERVAEAKRRLAAEVDEELA
RLTALQAVNPSVRDSELQALRQQREQGLAMLDKAALRLEAIRVLVAG
NT seq
2844 nt
NT seq
+upstream
nt +downstream
nt
atggcgcaatacgaaccggggcaacgctggatcagtgacagcgaagcggaattgggcttg
ggcaccatcctcatgcaggacggccgcatgctcaccgtgctctacccggccaccggcgaa
acccgccagtatgctgcgcgcaatgccccgctgacccgcgtgcgcttcgccccgggcgac
gagatcacccatttcgagggctggaagctgaccgtgcaggaggtcgaggacatcgacggc
ctgctggtctaccacggcctcaacggctcgcacgagagcatcagcctgccggaaacccag
ctgtcgaacttcatccagttccgcctggccagcgaccgcctgttcgccggccagatcgat
ccgctgccctggttcgccctgcgctaccgcaccctggagttcaccagcaagcagctacag
tcgccgctctggggcctgggcggcgcccgcgcgcaacccatcgcccaccagctgcacatc
gcccgcgaagtggccgatcgcatcgccccgcgggtgctgctggccgacgaagtgggcctg
ggcaagaccatcgaggccggcctggtgatccatcgccagctgctcaccggccgcgccagc
cgggtgctgatcctggtaccggagaacctccagcaccagtggctggtggagatgcgccgg
cgcttcaacctcgaggtggcgctgttcgacgccgagcgtttcatcgagagcgacgccagc
aaccccttcgaggacgcccagctggccctggtggccctggaatggctgcgcgaggacgag
cgcgcccaggatgccctgttcgccgccggctgggacctgctggtggtcgacgaggcccac
catctggtctggcatccggaacacgccagcccggaatacgtcctggtcgaacaactggcc
ggcgtcattcccggcgtactgctgctcaccgccaccccggagcaactgggccaggacagc
cacttcgcccgcctgcgcctgctcgacccacaccgtttccatgacctcgaggccttccgc
gccgagagcgcgcactaccgcccggtcgccgaagcggtacaggagctgctggaccagggc
cagctgtcgacccgcgcccaccgcaccatccacgacttcctcggccaggagggcgaaggc
ctgctggccgcggtcaatgccggcgaccaggacgccgccgcgcggctggtgcgcgagctg
ctcgaccgccatggcaccggccgcctgctgttccgcaacacccgcgccgcggtgcagggc
ttcccggagcgcgaactgcacccctacccgctgcccaatccggacgagtacatggagctg
ccgatcggcgaacatccggacctctacccggaggtcagctaccaggcccagagcgagctc
gacgacgaacagcgctggtggcgcttcgacccgcgggtcgagtggctgatcgacaccctg
aagatgctcaagaagttcaaggtgctggtgatctgcgcccacgccgagaccgccatggac
ctggaagacgccctgcgcgtgcgcaagggcatccccgccacggtgttccacgagggcatg
agcatcctcgagcgcgaccgcgccgcggcctatttcgccgacgaggagttcggcgcccag
gtgctgatctgctcggaaatcggcagcgaaggccgcaacttccagttcgcccaccacctg
gtgctgttcgacctgccggcccacccggacctgctcgagcagcgcatcggccgcctcgac
cgcatcggccagaagcaccgcatccagctgcacgtgccctacctggagaacagcccccag
gaacgcctgttccagtggtaccaccaggggctcaacgccttcctcgccacctgccccacc
ggcaacgccctgcagcagcagttcggcacgcgcctgctgccgctgctcgaaggcggcgac
gacgaccagtggcaacagctggtggacgaggcccgtgccgagcgcgagcgcctggagggc
gagctgcacgccggtcgcgaccgtctgctggagctcaactccggcggtgccggcgagggc
gaggccctggtggaggcgatcctcgagcaggacgaccagttcgccctgccgatctacatg
gaagcgctgttcgacgccttcggcatcgacagcgaggaccactcggagaacgccctgatc
ctgcgccccagcgagaagatgctggacgccagcttccccctgggcagcgacgagggggtg
accatcacctacgaccgcaaccaggcgctggcgcgcgaggacatgcagttcctcacctgg
gaacaccccatggtgcagggcggcatggacctggtgcgttccggctccatgggcaacacc
ggggtggcgctgatcaagaacaaggcgctcaagcccggcaccgtgctgctggagttgctc
tacgtcagcgaagtggtggcgccgcgcaacctgcagctgggccgctacctgccgccggcg
gcactgcgctgcctgctcgacgccaacggcaacgacctggccggcaaggtcgccttcgag
accctcaacgaccagctggaaagcgtgccgcgggccagcgccaacaagttcgtccaggcc
cagcgcgatgccctgaccccgctgatcaacggcggcgatgacaagatcgccccgcgtcac
gccgagcgggtcgccgaagccaagcgccgcctggccgccgaggtcgacgaggaactggcc
cgcctgaccgccctgcaggcggtcaatccgagcgtgcgcgacagcgagctgcaggccctg
cgccagcaacgcgagcagggcctggccatgctcgacaaggccgccctgcgcctggaggcg
atccgcgtactggtggccggataa
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