Pseudomonas benzenivorans: SBP02_14815
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Entry
SBP02_14815 CDS
T10569
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
pbez Pseudomonas benzenivorans
Pathway
pbez03030
DNA replication
pbez03430
Mismatch repair
pbez03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pbez00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
SBP02_14815 (dnaE)
03430 Mismatch repair
SBP02_14815 (dnaE)
03440 Homologous recombination
SBP02_14815 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pbez03032
]
SBP02_14815 (dnaE)
03400 DNA repair and recombination proteins [BR:
pbez03400
]
SBP02_14815 (dnaE)
Enzymes [BR:
pbez01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
SBP02_14815 (dnaE)
DNA replication proteins [BR:
pbez03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
SBP02_14815 (dnaE)
DNA repair and recombination proteins [BR:
pbez03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
SBP02_14815 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
DNA_pol_IIIA_C
tRNA_anti-codon
tRNA_anti_2
HROB
Motif
Other DBs
NCBI-ProteinID:
WPC04038
UniProt:
A0ABZ0PSA5
LinkDB
All DBs
Position
complement(3208725..3212252)
Genome browser
AA seq
1175 aa
AA seq
DB search
MTPSFVHLRLHSEYSLVDGLVRVKPLIKATAGAGMPAVAITDMSNMCALVKFYKAAMGAG
IKPICGADIWLASPEEDGPLSRMTLLAMNAKGYRNLTELISRGWMEGQSNDLVIIQRDWV
KAAAEGLIALSGSKEGEVGHALLEDDQAGAEALLREWQAAFPERFYLEVQRTNRVGDEEH
LHGAVALAEKLGVPLVATNDVRFIKQGDFEAHETRVCIGEGRSLDDPRRSRAYSDQQYLK
TPQEMWELFSDLPEALENSVEIAKRCNIEVQLGTYFLPNFPIPDGMTMDEYFRKVSFEGL
EERLAVLLPPDTPDYQAKKQVYIDRLNFELDIIIQMGFPGYFLIVMDFIQWAKNNGVPVG
PGRGSGAGSLVAYVQKITDLDPLAYDLLFERFLNPERVSMPDFDVDFCMDGRDRVIDYVA
EKYGRNAVSQIITFGSMAAKAVVRDVARAQGKSYGLADRLSKMIPFEVGMTLEKAYEQEE
ALRDFLKVDEEAAEIWEMSLKLEGITRGTGKHAGGVVIAPTKLTDFAPIACDEEGGGLVT
QFDKDDVEAAGLVKFDFLGLRTLTIIKWAMETIHRIQKREGAADEELVNIDFIPLDDKKT
YDMLQKAETTAVFQLESRGMKELIKKLKPDCLEDMIALVALFRPGPLQSGMVDDFINRKH
GRAELSYPHPDYQYAGLEPVLKPTYGIILYQEQVMQIAQVMAGYTLGEADMLRRAMGKKK
PEEMAKQRGGFIEGCASNNIDADLAGNIFDLVEKFAGYGFNKSHSAAYGLVSYQTAWLKA
HHPAPFMAAVLSADMHNTDKVVTLIEECRSMKLRLDAPDVNTSEFKFTVNDEGRIVYGLG
AVKGVGEGPVEAIVESRRDGPFKDLFDFCSRVDLKRINKRTLEALIRSGALDRLGPYFHD
EIKAYQANIDRNRAVLLAAMEEAVQAAEQTARSHDSGHMDLFGGVFADAETDVYVNHLKA
RELTLKERLKGEKDTLGLYLTGHPIDEYEGEVRRFARQRIVDLKPARDSQTVAGLIVALR
VMKNKKGDKMGFITLDDRSGRIEASLFADAFAGAQALLQTDALVVVEGEVSNDDFSGGLR
LRAKRVMSLEEARTGLAESLRLKVAGAALKGDRLRWLAELCSRHRGACPITLDYTGDAAK
ALLQFGENWRIDPADSLIQALRDQFGRDNVFLHYR
NT seq
3528 nt
NT seq
+upstream
nt +downstream
nt
atgaccccttccttcgtccatctgcgtctgcactccgagtactccctggtcgacggtctg
gtgcgggtcaagccgctgatcaaggcgaccgcgggcgccggcatgccggcggtggcgatc
accgacatgagcaacatgtgcgccctggtgaagttctacaaggcggccatgggcgccggg
atcaagccgatctgcggcgccgatatctggctggccagccccgaggaagacggtccgctg
agccgcatgaccctgctggcgatgaatgccaagggctatcgcaacctcaccgagctgatc
tcccgcggctggatggaggggcagagcaacgacctggtgatcatccagcgcgactgggtc
aaggccgccgccgaaggcctgatcgccctgtccgggtccaaggagggggaggtcggccat
gccctgctcgaggacgaccaggccggtgccgaggcgctgttgcgcgaatggcaggcggca
ttccccgaacgcttctatctggaggtgcagcgcaccaaccgggtgggcgacgaggaacac
ctgcatggtgccgtggccctggccgagaagctcggcgtgccgctggtggcgaccaacgac
gtgcgcttcatcaagcagggggatttcgaggcccacgagacccgcgtgtgcatcggcgaa
ggccgctccctggacgacccgcggcgctcccgtgcttactcggaccagcagtacctgaag
accccgcaagagatgtgggagctgttcagcgacctgcccgaggcgctggagaactccgtg
gagatcgcgaaacgctgcaatatcgaggtccagctcggcacctacttcctgccgaacttc
ccgattcccgacggcatgaccatggacgagtacttccgcaaggtctccttcgagggactc
gaggagcgtctggccgtgctgctgccgccggacaccccggactatcaggcgaagaagcag
gtctatatcgatcgcctgaatttcgagctggacatcatcatccagatgggctttcccggt
tacttcctcatcgtcatggacttcatccagtgggcgaagaacaacggtgtgccggtcggg
ccgggccggggctcgggcgccggctccctggtggcctatgtgcagaagatcaccgacctc
gacccgttggcctacgacctgctgttcgagcgcttcctcaatcccgagcgggtctccatg
cccgacttcgacgtcgacttctgcatggacggccgcgaccgggtgatcgactacgtggcc
gagaagtacggacgcaacgcggtcagtcagatcatcaccttcggttcgatggcggccaag
gcggtggtgcgcgacgtggcgcgggctcagggcaagtcctacggcctggccgatcgcctg
tcgaagatgatccccttcgaggtcggcatgaccctggagaaggcctacgaacaggaagag
gcgctgcgcgacttcctcaaggtcgacgaggaggcggcggaaatctgggagatgtctctc
aagctcgagggcatcacccgcggcaccggcaagcacgccggcggcgtggtgatcgcgccg
accaagctcaccgacttcgcgccgatcgcctgcgatgaagagggcggcggcctggtgacc
cagttcgacaaggacgacgtggaagcggccggcctggtcaagttcgacttcctcggcctg
cgcaccctgaccatcatcaagtgggcgatggaaaccatccatcgcatccagaagcgcgaa
ggcgctgcggatgaggagttggtcaacatcgacttcatcccgctggacgacaagaaaacc
tacgacatgctgcagaaggccgagaccacggcggtgttccagctcgagtcgcggggcatg
aaggagttgatcaagaagctcaagccggactgcctggaggacatgatcgctctggtggcg
ctgttccgcccggggccgctgcagtcgggcatggtggacgacttcatcaaccgcaagcac
ggccgcgccgagctgtcctacccgcaccctgactaccagtacgccggtctggaacctgtg
ctcaagcccacctacggcatcatcctgtaccaggaacaggtgatgcagatcgcccaggtc
atggccggctacaccctcggcgaggcggacatgctgcgtcgtgccatgggcaagaagaaa
cccgaggagatggccaagcagcgtggcggtttcatcgagggctgcgccagtaacaacatc
gacgcggacctggcgggcaacatcttcgacctggtggaaaaattcgccggctacggcttc
aacaagtcccactcggccgcctacggcctggtgtcctatcagaccgcctggctcaaggcc
catcaccccgcgccgttcatggcggcggtgctctcggccgatatgcacaacaccgacaag
gtggtgaccctgatcgaggagtgccgcagcatgaagctgcgcctcgatgcgccggacgtg
aacacctcggaattcaagttcaccgtcaacgacgaggggcgcatcgtctacggcctgggg
gcggtcaagggcgtcggcgaggggccggtggaggccatcgtcgagtcgcggcgcgacggg
ccgttcaaggacctgttcgacttctgctcgcgggtcgacctcaagcgcatcaacaagcgc
accctggaggcgctgatccgcagtggtgcgctggatcgcctgggaccgtacttccacgac
gagatcaaggcctaccaggccaatatcgaccgcaaccgcgcggtgctgctggcggccatg
gaggaagcggtgcaggcggcggagcagactgcccgcagccacgacagcggccacatggac
ctgttcggcggggtgttcgccgacgccgagaccgacgtctacgtcaatcacctcaaggcc
cgcgagctgacgctcaaggagcgcctgaagggcgagaaggacaccctcggcctgtacctc
accggccacccgatcgacgagtacgaaggcgaggtgcggcgcttcgcccgccagcgcatc
gtcgacctcaagccggcgcgcgacagccagacggtggccgggctgatcgtcgccctgcgg
gtgatgaagaacaagaagggcgacaagatgggcttcatcaccctcgacgaccgttcgggg
cggatcgaggcctcgctgttcgccgatgccttcgccggcgcccaggcgctgctgcagacc
gacgccctggtggtggtcgagggcgaggtgagcaacgacgatttctccggtggcctgcgc
ctgcgcgccaagcgggtgatgagcctggaagaggcccgcaccggcctggccgagagcctg
cgcctgaaggtcgccggcgcggccttgaagggcgaccgcctgcgctggctggccgagctg
tgcagccgccatcgcggtgcctgcccgatcaccctggattacaccggggacgcggccaag
gccctgctgcagttcggcgaaaactggcgcatcgacccggccgacagcttgattcaggca
ttgcgtgaccagttcggccgagacaacgtctttttgcactaccgctga
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integrated database retrieval system
