Pseudomonas benzenivorans: SBP02_15600
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Entry
SBP02_15600 CDS
T10569
Symbol
rhlB
Name
(GenBank) ATP-dependent RNA helicase RhlB
KO
K03732
ATP-dependent RNA helicase RhlB [EC:
5.6.2.7
]
Organism
pbez Pseudomonas benzenivorans
Pathway
pbez03018
RNA degradation
Brite
Enzymes [BR:
pbez01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
SBP02_15600 (rhlB)
Messenger RNA biogenesis [BR:
pbez03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
SBP02_15600 (rhlB)
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GFIT
Other DBs
NCBI-ProteinID:
WPC04186
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Position
3385742..3387208
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AA seq
488 aa
AA seq
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MLKALKKMFGKAEGEQADTLTAPATPRSQNARDEKPNRPAKPKDAGRAATDSAEAPDNAA
AKPARGGKGNASKPRRERAAKPVDNWKLEDFVVAPAEGKTRFHDFDLDPRVMHAIHDLGF
PYCTPIQAQVLGYTLKGQDAIGRAQTGTGKTAAFLVSIISQLLQTPPPKERYMGEPRALI
IAPTRELVVQIANDAIGLTKYSGLNVMSFVGGMDFDKQLKQLESRFCDILVATPGRLLDF
NQRGEVHLDMVEVMVLDEADRMLDMGFIPQVRQIIRQTPMKGERQTLLFSATFTEDVMNL
AKQWTVNPAIVEIEPENVASDTVEQHVYAVASADKYKLLYNLITQNDWSRVMVFANRKDE
VRRIEERLTRDGVSAVQMSGDVPQHKRIRALEGFREGKIRVMVATDVAGRGIHVEGISHV
INFTLPEDPDDYVHRIGRTGRAGTSGTSISFAGEDDAFALPPIEALLGRKINCEMPPDAL
LKPVPRKH
NT seq
1467 nt
NT seq
+upstream
nt +downstream
nt
gtgctcaaagcactcaagaagatgttcggcaaagccgagggcgagcaagccgatacgctc
actgcgccggcaacccctcgcagccaaaacgcccgagacgagaagcccaaccgccccgcc
aagcccaaagacgccggacgtgcggccactgacagtgccgaggcgccagacaatgccgca
gccaaaccggcacgcggcggcaagggcaacgccagcaagccacgccgcgaacgtgcggcc
aagcccgtcgacaactggaagctggaagacttcgtggtggcacctgccgaaggcaagacc
cgcttccacgacttcgacctcgatccgcgggtgatgcacgccatccacgacctcggcttc
ccttattgcacgccgatccaggcccaggtcctcggctacaccctcaagggccaggacgcc
atcggccgcgcccagaccggcaccggcaagaccgcggccttcctcgtctcgatcatcagt
cagctgctgcagaccccgccgccgaaagagcgctacatgggcgagccgcgcgcactgatc
atcgccccgacccgcgagctggtggtgcagatcgccaacgatgccatcggcctgaccaag
tacagcggcctgaacgtgatgagcttcgtcggcggcatggacttcgacaagcagctcaag
caactggaatcgcgcttctgcgacatcctggtcgccaccccgggccgcctgctggacttc
aaccagcgcggcgaggtgcacctggacatggtcgaggtgatggtgctcgacgaggccgac
cgtatgctcgacatgggcttcatcccccaggtacggcagatcatccgccagaccccgatg
aagggcgaacgccagaccctgctgttctccgccaccttcaccgaagacgtgatgaacctg
gccaagcagtggacggtgaatccggccatcgtcgagatcgagccggagaacgtcgccagc
gacacggtcgagcagcacgtctatgcggtcgccagcgccgacaagtacaagctgctgtac
aacctgatcacccagaacgactggagccgggtgatggtcttcgccaaccgcaaggacgag
gtgcggcgcatcgaggagcgcctgacccgcgacggcgtcagcgccgtgcagatgtccggc
gacgtgccccagcacaagcgcatccgcgccctggaaggcttccgcgaaggcaagatccgc
gtgatggtggccaccgacgtggccggccgcggcatccatgtcgaaggcatcagccatgtg
atcaacttcaccctgccggaagacccggacgactacgtgcaccgcatcggccgcaccggc
cgcgccggcaccagcggcacctccatcagcttcgccggcgaggacgacgccttcgccctg
ccgccgatcgaggcgctgctggggcgcaagatcaactgcgagatgccgccggacgcgctg
ctcaagccggtgccgcgcaagcactga
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