Pseudomonas benzenivorans: SBP02_16765
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Entry
SBP02_16765 CDS
T10569
Name
(GenBank) sigma-54 dependent transcriptional regulator
KO
K02667
two-component system, NtrC family, response regulator PilR
Organism
pbez Pseudomonas benzenivorans
Pathway
pbez02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
pbez00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
SBP02_16765
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
pbez02022
]
SBP02_16765
02035 Bacterial motility proteins [BR:
pbez02035
]
SBP02_16765
Two-component system [BR:
pbez02022
]
NtrC family
PilS-PilR (type 4 fimbriae synthesis)
SBP02_16765
Bacterial motility proteins [BR:
pbez02035
]
Pilus system
Twitching motility proteins
SBP02_16765
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma54_activat
Response_reg
Sigma54_activ_2
AAA_lid_14
HTH_8
HTH_50
AAA_5
AAA_19
Pre_tape_measure
HTH_30
AAA_22
VpsR
Motif
Other DBs
NCBI-ProteinID:
WPC04402
UniProt:
A0ABZ0PUS1
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All DBs
Position
3629415..3630752
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AA seq
445 aa
AA seq
DB search
MNRQRALIVDDEPDIRELLEITLGRMKLDTRSARNVKEARDWLAKEPFDLCLTDMRLPDG
TGLELVQYIQQRHPQVPVAMITAYGSLDTAINALKAGAFDFLTKPVDLGRLRELVATALR
LRTTEGENTPVDSRLLGDSPPMQTLRKQILKLARSQAPVYISGESGSGKELVARLIHEQG
PRSEQPFVPVNCGAIPSELMESEFFGHKKGSFTGAVEDKQGLFQAANGGTLFLDEVADLP
LPMQVKLLRAIQEKAVRAVGGQQEAVVDVRILCATHKDLAAEVAAERFRQDLYYRLNVIE
LRVPPLRERREDIAQLATAMLKRLAADTGLSLAQLETEALEKLKSYRFPGNVRELENMLE
RAYTLCEDDRISASDLRLSDACSPGENGEASLAQIDNLEDHLEDIERKLIMQALEETRWN
RTAAAQRLGLTFRSMRYRLKKLGID
NT seq
1338 nt
NT seq
+upstream
nt +downstream
nt
atgaaccgccagagagccctgatcgtcgatgacgagcccgatatccgcgaactgctggag
atcaccctaggccggatgaagctcgacacccgcagcgcccgcaacgtcaaggaggcgcgc
gactggctggccaaggagccgttcgatctgtgcctgaccgacatgcgcctgcccgacggc
accgggctggagctggtgcaatacatccaacagcgccacccgcaggtaccggtggcgatg
atcaccgcctacggcagcctggacaccgcgatcaacgcgctcaaggccggggccttcgac
ttcctgaccaagccggtggacctgggccgcctgcgcgagctggtcgccacggccctgcgc
ctgcgcaccaccgagggcgaaaacacgccggtggacagccgcctgctcggcgactcgccg
cccatgcagacactgcgcaaacagatcctcaaactcgcccgcagtcaggcgccggtgtat
atcagcggcgagtccggcagcggcaaggagctggtcgcccgcctgatccacgaacaggga
ccacgcagcgagcagcccttcgttccggtcaactgcggcgccattccctcggaactgatg
gagagcgagttcttcgggcacaagaaaggcagcttcaccggcgccgtggaggacaagcag
gggctgttccaggccgccaacggcggcaccctgttcctcgacgaggtcgccgacctgccg
ctgccgatgcaggtcaagctgctgcgggcgatccaggagaaggccgtgcgcgcggtcggt
ggccagcaggaggcggtggtcgatgtgcgcatcctctgcgccacccacaaggacctggcc
gcggaagtggccgccgaacgcttccgccaggacctctactaccgcctcaacgtcatcgag
ctacgcgtgccgccactacgcgagcgccgcgaagacatcgcccagctggccacggccatg
ctcaagcgcctggccgcagacaccggcctgagcctcgcccaactcgagaccgaggccctg
gagaagctcaagagctaccgcttccccggcaacgtgcgcgagctggagaacatgctcgag
cgcgcctacaccctgtgcgaggacgaccgcatcagcgccagcgacctgcgcctgagcgat
gcctgcagccccggtgagaacggcgaggccagcctggcgcaaatcgacaacctggaagac
cacctggaagacatcgagcgcaagctgatcatgcaggcactcgaagaaacccgctggaac
cgcaccgccgccgcccagcgcctgggcctgacctttcgctcgatgcgctaccgcctgaag
aagctggggatcgattga
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