KEGG   Pseudomonas benzenivorans: SBP02_17700
Entry
SBP02_17700       CDS       T10569                                 
Symbol
ribD
Name
(GenBank) bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD
  KO
K11752  diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193]
Organism
pbez  Pseudomonas benzenivorans
Pathway
pbez00740  Riboflavin metabolism
pbez01100  Metabolic pathways
pbez01110  Biosynthesis of secondary metabolites
pbez01240  Biosynthesis of cofactors
pbez02024  Quorum sensing
Module
pbez_M00125  Riboflavin biosynthesis, plants and bacteria, GTP => riboflavin/FMN/FAD
Brite
KEGG Orthology (KO) [BR:pbez00001]
 09100 Metabolism
  09108 Metabolism of cofactors and vitamins
   00740 Riboflavin metabolism
    SBP02_17700 (ribD)
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    SBP02_17700 (ribD)
Enzymes [BR:pbez01000]
 1. Oxidoreductases
  1.1  Acting on the CH-OH group of donors
   1.1.1  With NAD+ or NADP+ as acceptor
    1.1.1.193  5-amino-6-(5-phosphoribosylamino)uracil reductase
     SBP02_17700 (ribD)
 3. Hydrolases
  3.5  Acting on carbon-nitrogen bonds, other than peptide bonds
   3.5.4  In cyclic amidines
    3.5.4.26  diaminohydroxyphosphoribosylaminopyrimidine deaminase
     SBP02_17700 (ribD)
SSDB
Motif
Pfam: RibD_C dCMP_cyt_deam_1 MafB19-deam Inv-AAD
Other DBs
NCBI-ProteinID: WPC04580
UniProt: A0ABZ0PVP1
LinkDB
Position
complement(3817526..3818644)
AA seq 372 aa
MHNTDQGFMARALELARKGLYSTHPNPRVGCVIVAGGRIIGEGWHARAGEPHAEVHALRQ
AGDRARGATAYVTLEPCSHHGRTPPCADALIAAGLKRVVAAMRDPNPQVAGNGLARLQQA
GIEVHCGVLEAEARSLNAGFVKRMEQGLPLVRVKLAMSLDGRTAMASGESQWITGPAARA
AVQRLRARSSVVLSGADTVLADGALLTVRPDELGLGAELTALAAARPPLRVLVDGRLRVP
LDVPFFQAGPALVATCAAAAARERFLEEGHELLAVPGSNGHVHLGKLLAELAARGANEVL
VEAGPRLAGAFARQGLVDEYQLFVAPKLLGSSARPLLDLPLARMAEALELKIVDLRAVGD
DWRIVAVPKGRD
NT seq 1119 nt   +upstreamnt  +downstreamnt
atgcacaacaccgatcagggcttcatggcccgcgccctcgagctggcccgcaagggcctg
tactccacccatcccaatccgcgcgtcggctgcgtgatagtcgcaggtggacgcatcatc
ggtgagggctggcatgcccgggccggggagccccatgccgaggtgcatgcgctgcgccag
gccggcgaccgggcccggggcgccaccgcctatgtcaccctggagccctgcagccatcat
ggccgcaccccgccctgcgccgatgcgctgatcgccgccggcctcaaacgggtggtcgcg
gccatgcgcgaccccaacccgcaggtggccggcaacggcctggcgcgcctgcagcaggcc
ggcatcgaggtgcactgtggcgtgctcgaggccgaggcgcgcagcctcaacgcgggcttc
gtcaagcgcatggagcagggcctgccgctggtgcgagtcaaactggcgatgagcctggac
ggtcgcaccgccatggccagtggtgagagtcaatggatcaccggcccggcggcgcgggcg
gcggtgcagcgcctgcgcgcccgctccagcgtggtattgagcggcgccgacacggtgctg
gccgacggcgcgctgttgaccgtgcgcccggacgagctgggcctgggcgccgaactgacc
gccctggccgcggcccgtccaccgctgcgggtgctggtcgacgggcgcctgcgggtgccg
ctggacgtgcccttcttccaggccgggccggcactggtggccacctgtgccgcggccgcg
gcgcgcgagcgcttcctcgaggaggggcacgagctgctggccgtgcccggcagcaacggt
catgtacacctgggcaagttgttggccgagctggccgcccgcggcgccaacgaggtgctg
gtcgaggccggaccacggctggccggcgccttcgcccgccagggactggtcgacgaatac
cagttgttcgtcgcgcccaagctgctcggctccagcgcccgcccgctgctcgacctgccc
ctggcgcgcatggccgaggccctggagctgaagatcgtcgacctgcgcgccgtgggcgat
gactggcggatcgtcgccgtgcccaagggccgggactga

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