Pseudomonas benzenivorans: SBP02_17825
Help
Entry
SBP02_17825 CDS
T10569
Symbol
rpoA
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
pbez Pseudomonas benzenivorans
Pathway
pbez03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
pbez00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
SBP02_17825 (rpoA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pbez03021
]
SBP02_17825 (rpoA)
03400 DNA repair and recombination proteins [BR:
pbez03400
]
SBP02_17825 (rpoA)
Enzymes [BR:
pbez01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
SBP02_17825 (rpoA)
Transcription machinery [BR:
pbez03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
SBP02_17825 (rpoA)
DNA repair and recombination proteins [BR:
pbez03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
SBP02_17825 (rpoA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
RNA_pol_A_CTD
RNA_pol_L_2
AMIN-like
Motif
Other DBs
NCBI-ProteinID:
WPC04605
LinkDB
All DBs
Position
complement(3842219..3843220)
Genome browser
AA seq
333 aa
AA seq
DB search
MQISVNEFLTPRHIDVQVVSPTRAKITLEPLERGFGHTLGNALRRILLSSMPGCAVVEAE
IDGVLHEYSAIEGVQEDVIEILLNLKGLAVKLHGRDEVTLTLAKKGSGVVTAADIQLDHD
VEIVNGDHVIANLAANGALNMKLTVARGRGYEPADARQSDEDESRSIGRLQLDASFSPVR
RVSYVVENARVEQRTNLDKLVIDLETNGTLDPEEAIRRAATILQQQLAAFVDLKGDSEPV
VVEQEDEIDPILLRPVDDLELTVRSANCLKAENIYYIGDLIQRTEVELLKTPNLGKKSLT
EIKDVLASRGLSLGMRLDNWPPASLKKDDKATA
NT seq
1002 nt
NT seq
+upstream
nt +downstream
nt
atgcagatttcggtaaatgagttcctgaccccccgtcacattgatgtgcaggtggtcagt
ccgacccgcgccaagatcaccctcgagcctctcgagcgtggtttcggccataccctgggc
aacgcgctgcgccgcatcctgttgtcctccatgcctggctgtgcagtagtcgaggccgag
attgacggtgtgctccacgagtacagcgccatcgaaggtgtgcaggaagatgtcatcgag
atcctgctcaatcttaaaggcctggctgtcaagctgcacggtcgcgacgaagtgacgctg
actctggcgaagaagggctcgggtgtagtgaccgctgccgatattcagctggatcacgat
gtcgaaatcgtcaacggcgaccacgtaatcgccaatctggccgccaatggcgcgttgaac
atgaagctcaccgtggcccgtggccgcggttatgagccggccgacgcgcgccagagcgac
gaagacgagagccgcagcatcggtcgcttgcagctcgacgcttcgttcagcccggtgcgc
cgtgtgtcctacgtggtggaaaacgctcgtgtcgagcagcgtaccaacctggacaagctg
gttatcgacctggaaaccaacggtaccctggatccggaagaggctatccgtcgtgccgcg
accattctgcagcagcagctggccgcgttcgtcgacctcaagggtgacagtgagcctgtg
gtagtcgagcaggaagacgagatcgatccgatcctgctgcgcccggtcgacgacctggaa
ctgaccgtacgttcggccaactgcctcaaggcagaaaacatctactacatcggcgatctg
attcagcgcaccgaagtagagctgttgaaaaccccgaacctgggcaagaaatccctgact
gagatcaaggatgttctggcttctcgcggtctgtccctcggtatgcgcctcgacaactgg
ccgccggcaagtctgaagaaagacgataaggcgactgcctga
DBGET
integrated database retrieval system
