KEGG   Pseudomonas benzenivorans: SBP02_17980
Entry
SBP02_17980       CDS       T10569                                 
Symbol
rpoC
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
  KO
K03046  DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
Organism
pbez  Pseudomonas benzenivorans
Pathway
pbez03020  RNA polymerase
Brite
Enzymes [BR:pbez01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     SBP02_17980 (rpoC)
Transcription machinery [BR:pbez03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Core subunits
     SBP02_17980 (rpoC)
DNA repair and recombination proteins [BR:pbez03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase complex (RNAP)
      SBP02_17980 (rpoC)
SSDB
Other DBs
NCBI-ProteinID: WPC04636
LinkDB
Position
complement(3860090..3864289)
AA seq 1399 aa
MKDLLNLLKNQGQIEEFDAIRIGLASPEMIRSWSFGEVKKPETINYRTFKPERDGLFCAK
IFGPVKDYECLCGKYKRLKHRGVICEKCGVEVALAKVRRERMAHIELASPCAHIWFLKSL
PSRIGLLMDMTLRDIERVLYFESYVVIDPGMTTLEKGQLLNDEQYFEALEEFGDDFDARM
GAEAVRELLHAIDLEHEIGRLREEIPQTNSETKIKKLSKRLKLMEAFQGSGNLPEWMILT
VLPVLPPDLRPLVPLDGGRFATSDLNDLYRRVINRNNRLKRLLDLSAPDIIVRNEKRMLQ
EAVDALLDNGRRGRAITGSNKRPLKSLADMIKGKQGRFRQNLLGKRVDYSGRSVITVGPT
LRLHQCGLPKKMALELFKPFIFGKLEMRGLATTIKAAKKMVERELPEVWDVLAEVIREHP
VLLNRAPTLHRLGIQAFEPVLIEGKAIQLHPLVCAAYNADFDGDQMAVHVPLTLEAQLEA
RALMMSTNNILSPANGEPIIVPSQDVVLGLYYMTREAVNAKGEGRVFADLQEVDRVFRAG
EASLHARVKVRINETIKEKDGSITQNTRIVDTTVGRALLFQIVPAGLPYDVVNQSMKKKA
ISKLINQCYRTVGLKDTVIFADQLMYTGFAYSTISGVSIGVNDFVIPDEKARIIDAATEE
VKEIESQYASGLVTQGEKYNKVIDLWSKANDEVSKAMMGNLSKEKVIDRDGNEVEQESFN
SMYMMADSGARGSAAQIRQLAGMRGLMAKPDGSIIETPITANFREGLSVLQYFISTHGAR
KGLADTALKTANSGYLTRRLVDVAQDLVVTEVDCGTEQGLLMTPHIEGGDVVEPLGERVL
GRVIARDVFKPGTDDVIVPAGTLVDEQWVEFIELNSIDEVIVRSPISCETRYGICAKCYG
RDLARGHQVNIGEAVGVIAAQSIGEPGTQLTMRTFHIGGAASRTSAADSVQVKNGGAIRL
HNLKHVERLDGALVAVSRSGELAVADEFGRERERYKLPYGAVISVKEGDKVEAGAIVAKW
DPHTHPIVTEMMGTVTFVGMEEGITIKRQTDELTGLTNIEVLDPKDRPASGKDIRPAVKL
VDASGKELLLPGTDVPAQYFLPANALVGVADGGQVNVGDVIARIPQETSKTRDITGGLPR
VADLFEARRPKEPSILAEISGTISFGKETKGKRRLVITPTDGSDPYEELIPKWRHLNVFE
GEQVNKGEVISDGPSNPHDILRLLGVSALAKYIVNEIQDVYRLQGVKINDKHIETILRQM
LRKVEVSESGDSSFIKGDQVELTQVLEENERLSGDDRFIAKYDRVLLGITKASLSTESFI
SAASFQETTRVLTEAAVTGKRDFLRGLKENVVVGRLIPAGTGLAYHSERKRKRDADKPVR
VSASEVEAALTEALNSSGS
NT seq 4200 nt   +upstreamnt  +downstreamnt
ttgaaagacctactgaatttgctgaaaaaccagggtcagatcgaagagttcgacgccatc
cgtatcgggttggcctcgcctgagatgatccgttcgtggtcgttcggtgaagtgaaaaag
ccggaaaccatcaactaccgtaccttcaagcccgagcgcgatggtctgttctgcgccaag
atctttggcccggtgaaggactatgagtgcctgtgcggcaagtacaagcgcctcaagcac
cgcggcgtgatctgcgagaagtgcggcgtcgaagtggccctggccaaggtgcgccgcgag
cgcatggcgcacatcgagctggcctcgccctgtgcccacatctggttcctcaagtcgctg
ccgagccgcatcggcctgctgatggacatgaccctgcgtgacatcgagcgcgtgctctat
ttcgagagctacgtggtgatcgacccgggcatgaccaccctggagaagggccagctgctg
aacgacgagcagtacttcgaggcgctggaagagttcggtgacgacttcgacgcgcgcatg
ggcgccgaggccgtgcgcgagctgttgcacgccatcgacctggagcacgagatcggtcgc
ctgcgcgaagagattccgcagaccaactcggaaaccaagatcaagaagctgtccaagcgc
ctcaagctgatggaagccttccagggctccggcaacctgccggagtggatgatcctcacc
gtgctgccggtgctgccgccggacctgcgtccgctggtaccgctggacggcgggcgcttc
gcgacctccgacctgaacgacctgtaccgtcgggtgatcaaccgtaacaaccgcctcaag
cgcctgctcgatctgtccgcgccggacatcatcgtgcgcaacgagaagcgcatgctgcag
gaagcggtcgacgccctgctcgacaacggccgtcgcggtcgcgccatcaccggctcgaac
aagcgtccgctgaagtccctggccgacatgatcaagggtaagcagggccgcttccgccag
aacctgctgggtaagcgcgtggactactccggtcgttccgtgatcaccgtgggtccgacc
ctgcgcctgcaccagtgcggcctgccgaagaagatggccctggagctgttcaagccgttc
attttcggcaagctggaaatgcgtggtctggcgaccaccatcaaggccgccaagaagatg
gtcgagcgcgagctgccggaagtctgggacgtgctcgccgaggtgatccgcgaacacccg
gtgctgctcaaccgtgcaccgaccctgcaccgtctgggtatccaggcgttcgagccggtg
ctcatcgaaggcaaggcgatccagctgcacccgctggtctgcgccgcgtacaacgccgac
ttcgacggtgaccagatggccgtacacgtgccgctgacgctggaggcccagctggaagcg
cgcgcgctgatgatgtcgaccaacaacatcctctcgccggccaacggcgagccgatcatc
gtgccgtcccaggacgtggtactgggtctgtattacatgacccgtgaagccgtcaacgcc
aagggcgaaggccgcgtgttcgccgacctgcaggaagtcgaccgggtgttccgcgccggc
gaagcctcgctgcacgctcgcgtcaaggtacggatcaacgagaccatcaaggagaaggac
ggctcgatcacccagaacacccgcatcgtcgacaccaccgtcggccgtgcgctgctgttc
cagatcgttccggccggcctgccttacgacgtggtcaaccagtcgatgaagaagaaggcg
atctccaagctgatcaaccagtgctaccgcaccgttggcttgaaggacaccgtgatcttc
gccgaccagttgatgtacaccggtttcgcctactcgaccatttccggtgtgtcgatcggc
gtcaacgacttcgtcatcccggacgagaaggcgcggatcatcgacgccgccaccgaggaa
gtgaaggagatcgagagccagtacgcctccggcctggtgacccagggcgagaagtacaac
aaggtgatcgacctgtggtcgaaggccaacgacgaagtgtcgaaggcgatgatgggcaac
ctgtcgaaagagaaggtcatcgatcgcgatggcaacgaagtcgagcaggagtccttcaac
tccatgtacatgatggccgactccggtgcgcggggttccgccgcccagatccgtcagctc
gccggtatgcgtggcctgatggccaagccggacggctcgatcatcgagacgccgatcacc
gcgaacttccgcgagggtctgtcggttctgcagtacttcatctccacccacggtgcccgt
aagggtctggcggataccgccctgaagaccgcgaactccggttacctgacccgtcgcctg
gtcgacgtggcccaggacctggtggtgaccgaggtcgattgcggcaccgagcagggtctg
ctgatgaccccgcacatcgaaggcggcgacgtggtcgagcccctgggtgagcgcgtgctg
ggccgagtgatcgcccgtgacgtgttcaagccgggcaccgacgacgtcatcgtcccggcc
ggcaccctggtcgacgagcagtgggtcgagttcatcgagctgaacagcatcgacgaagtg
atcgtgcgttcgccgatcagctgcgaaacccgctacggcatctgcgccaagtgctacggt
cgcgatctggcccgtggtcaccaggtgaacatcggcgaggccgtcggcgtcatcgccgcc
cagtcgatcggtgagccgggtacccagctgaccatgcgtaccttccacatcggtggtgcg
gccagccggacctccgcagccgacagcgtccaggtgaagaacggcggcgcgatccgcctg
cacaacctcaagcacgtcgagcgcctggatggcgcgctggtcgcggtttcgcgttccggc
gagctggcggtggccgacgagttcggtcgcgagcgcgagcgctacaagctgccttacggt
gcggtgatttcggtcaaggaaggcgacaaggtcgaagcgggcgccatcgtcgccaagtgg
gacccgcacacccacccgatcgtcaccgagatgatggggaccgtgaccttcgtcggcatg
gaagaaggcatcaccatcaagcgccagaccgacgaactgaccggtctgaccaacatcgag
gtcctcgatccgaaggatcgtccggcgtccggcaaggacatccgtccggcggtcaagctg
gtcgacgcctccggcaaggagctgctgctgccgggcaccgacgtgccggcccagtacttc
ctgccggccaacgccctggtgggtgtggctgacggtggtcaggtcaacgtgggtgacgtc
atcgcacgtatcccgcaggaaacctcgaagacccgcgacatcaccggtggtctgccgcgc
gttgccgacctgttcgaggcgcgccggccgaaagagccgtcgatcctcgccgagatcagc
ggcaccatctccttcggcaaggaaaccaagggcaagcgccgcctggtgatcacgccgacc
gatggcagcgatccgtacgaggagctgattccgaagtggcgtcacctcaacgtcttcgaa
ggcgaacaggtgaacaagggcgaagtcatctccgacggcccgagcaacccgcacgacatc
ctgcgtctgctcggtgtcagcgcgctggccaagtacatcgtcaacgagatccaggacgtt
taccgcctgcagggcgtgaagatcaacgacaagcacatcgagaccatcctgcgccagatg
ctgcgcaaggtcgaagtgtccgagtcgggcgactccagcttcatcaagggcgatcaggtc
gagctgacccaggtgctggaagagaacgagcgcctgtcgggcgacgatcgcttcatcgcc
aagtacgaccgcgtgctgctgggtatcaccaaggcctcgctgtccaccgagtcgttcatc
tcggcggcatcgttccaggagaccacccgcgtcctcaccgaggccgcggtcaccggcaag
cgcgatttcctccgcggtctgaaggaaaacgtggtggtcggtcgcttgatcccggccggt
accggtctggcctatcacagcgagcgcaagcgcaagcgtgatgccgacaagccggtccgt
gtcagcgccagtgaggtggaagccgcactgaccgaggcgctgaactccagcgggagctaa

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