Pseudomonas benzenivorans: SBP02_18420
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Entry
SBP02_18420 CDS
T10569
Name
(GenBank) DEAD/DEAH box helicase
KO
K06877
DEAD/DEAH box helicase domain-containing protein
Organism
pbez Pseudomonas benzenivorans
SSDB
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Gene cluster
GFIT
Other DBs
NCBI-ProteinID:
WPC04707
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Position
3951889..3958104
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AA seq
2071 aa
AA seq
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MLYKKNYFSALTTNLSTRSERAAQGLLSLGSPHLRQFLHDQLIASPGTPGAWLADPVFEP
TFGWEESNETMGSLSGGNLLHPRLAEAMASPPKDLAQEYTFPYTRHPFTHQLAAWKTLNS
QKPQSLVVTSGTGSGKTECFLVPVLNHLAKEIDTGEDLEGVRALFIYPLNALINSQQNRL
DAWTDGFGGQIRHCLYTGALENERKASDQQYKGQVIDRKSLRERPPQLLVTNATMLEYML
IRKDDESILQKSAGKLRWIILDEAHTHIGSQAAEMALLLRRVMLAFQVKPQDVRFVATSA
TFGSDMQTIESLRKFLADIGGVAPEQVHVVQGHRDIPALLDAKPEISQDTPESIEAIEGE
QEQSALRYRRLEASPTARRLRSLFIPDGQVKPQSLQGLTKASGLTAAQILAWLDLMSGTK
SADGLSYLPLRAHLFHNVIPAIRACVDRNCAYKAGTALDHAEWPFGMVYLEERTHCRCNA
PLMPLVSCEECNESFLQAKPTSSGRLIDQSQQQVDEFSLDEDSVDAEDQVDNDSESLSQI
LITNRPVTHGRSEFLDRTSQKLMFDGPKEDYIELQVFQSHKNECPCCGATIQGRSLLRPA
RIGTPFTLSTVIGTLLEFCPPDPMPSGKPFQGRKLISFTDSRQGTARIAVKLQQDSERNR
IRGLIYQRLLQAQPAAAMSEEELQDFHDLQARAASQTLDRYAQKYLEQLQEKQAETAKGT
EIRWTDMVNHLASTPDLQLGILDYYHGLAPKTFGKQDSIALAKMLLAREFFRRPKRANSL
ETLGLVQVCYPKLTNITTKPMAWPAHLDVESWRTYLKVLLDFFVRQNAILNIDKQWQSLI
GIRISPKWVVAPVSDGKPDRLPGRYARWPTVNTVSSAQSRAILLLCKAFNWSTAAHQDQI
DSILRDAWQALTQQAKLLISSGDGYQLDLNDLSFRLPTEVYLCPVSRRFIDTPFEQLSPY
TPRTDRAMVVKVTPYTLPRPPEDLLHLPGDDGLLATRDWLNTQPEIQQLRQESLWSDVMD
LVIEGGNYFHAAEHSAQQPKHKLDTYESMFKAGKLNLLSCSTTMEMGVDIGGISVVAMNN
VPPHPANYLQRAGRAGRRREGRSLALAVCKNTPHDQSVFNNPLWPFSTPMRMPKVSLQSP
ELVQRHINAWLLSHWLKHVVAAQEIKSMTAGAFFLDGEMPMSLAKRFCLWCNNQASEAEP
QVVQAIKDITRRSILDSAPQPELLKRASSSLTEIMQAWRQEHEASHSQLLQIADKKAVAS
RAMEAQLSRIEKEYLLSELADRRFLPGYGFPTDIVSFDNRCMQTLKLEEVDKREDNRARY
RSLASRDRVTGLREYAPGAELVMDGLVYKSSGITLNWHAPASAEGIKELQLFKKAWRCGH
CGASDTAINPGLEINCQDCGAPIERDEIREYLVPAGFAVDFFDEPHNDISRLQYVPVKAP
WLNVPSSWVCLANPALGQFRSSQQAHLFHYTSGANQQGFAICLECGKAEPMLSHPDTSAP
ANEQYLPAIFRQKAQHRRLRGGKNDDGGNICPGSQNSWKIKQGIHLGHDSLTDALELVLR
TPSNGELLNDDITGYSIAVALREAIAAELGVQTEELGCDCHPIRVEGSPTRAIRIFDLRS
GGYTSQAAERLNDSSLWQRVITRLDSCNCSHACQRCLLSFDTRFEADRLNRHAALEWINQ
TWLTGLELPPELAVLGSQSQAEITTLLEAVERAITQDDNAKTVTVYLAAPAEDWDLAVAR
RLRHQLQNWEDAGHQVQLHLLESTFAALPSDQREWLAKLSFNGIQICLHKAMPDLGVLAL
NITVHGARSNFAWASDNANLAAPGRTWDLAAAGVRIIRGVPPTLKPERVLDTSDLLPPAP
QGLVKVEIGNHLDGSLDGFARRLWEHLRQEAGSLVADAITGQDPIIELVYSDRYVCSPLV
VNLLVNMIHEIGAHSDEGFAIRIQGRKYQKDDNRSPWQCRHDWRTSQERDHAIRQALEYC
GLEADVLSLPALPHYRQLQLQLRSGKQLTIQFDQGLSYWEAERSAKPYLLRFDFSSPQLG
EKIMTRIQCRVLAASDENTQIFISSTGCSNG
NT seq
6216 nt
NT seq
+upstream
nt +downstream
nt
atgctctataaaaagaattatttctccgccctaaccacgaacctgagcacccgcagcgaa
cgtgctgcgcagggcctgctcagccttggcagcccccacctgcgccagttcctgcatgat
cagttgatcgcctcaccgggcaccccaggagcctggcttgcagatccagttttcgaaccg
accttcggttgggaagaaagcaatgaaaccatgggatctctgtccggcggcaatctattg
cacccgcgtcttgctgaagccatggcatccccgcccaaggatcttgcccaagaatatacc
ttcccctacacccggcatccattcactcaccagttggcggcttggaaaacattaaatagc
cagaagccgcaatcactggtggttaccagtggcaccggatcaggaaagaccgaatgtttc
ctggtaccggttctcaaccatttggcgaaggagatcgatacaggggaagatctggagggg
gttcgtgccctgttcatctatccactgaatgccctgatcaactcacagcaaaatcgtcta
gacgcctggaccgatggctttggcgggcagattcgccactgtctgtacacaggcgcactg
gagaatgagcgaaaggcttccgatcagcagtataagggccaggtgatcgaccgtaagagc
ctgcgagagcggccgccacagctactcgtaaccaatgcgaccatgctcgagtacatgctc
attcgtaaagacgatgagtctatcctgcaaaagtcggccggaaagctacgctggatcatt
cttgacgaggctcatacccatatcggttctcaagcagctgagatggctctgttgctgcga
cgcgtgatgctggcatttcaagttaagcctcaggatgtccgcttcgttgcgacttcagct
accttcggctcggatatgcaaaccatcgagagcctacgcaagttcctcgccgatatcggc
ggagtggctccggagcaggtgcatgtcgtgcagggccaccgggatattccagcgttgctg
gacgccaagccagagatctctcaggacacgcccgaatccatagaggccatcgagggagaa
caagagcaatctgcgctgcgctaccggcgcctggaggccagcccgactgctcggaggttg
cgctccctgttcattcctgatggacaagtaaaaccgcaaagcctgcagggtctcacgaaa
gcatccggtctcacggcagcacaaattctggcctggctggatctgatgtccggcaccaaa
agtgccgacgggctgtcctacctaccgttacgagcgcacctcttccacaatgtaatcccg
gcaatccgcgcctgcgtggatcgaaactgcgcttataaggctggcacagcgctggatcac
gcggagtggcccttcggcatggtgtatctggaggagcgaacccattgccgctgcaatgcc
ccactaatgccgctagtctcctgtgaggagtgcaatgagagcttcttgcaggcaaaacct
acaagcagcggaagattgatcgatcagtcgcaacaacaggtcgacgaattttctctagat
gaagactctgtggatgcggaagaccaagtcgataacgacagtgaatcactgagccagatc
ctgattaccaaccgccccgtgacgcacggccgctctgagttccttgatcgcactagccag
aaactgatgttcgatggtcccaaggaagactacatcgaactgcaggttttccagagccac
aaaaatgagtgcccatgctgtggcgccacaatccaaggtcgcagcctgctgcgaccggcc
cgcatcggcacgcccttcaccttgagtacggttattgggaccctattggaattttgccct
ccagacccgatgccgtccggcaagcctttccagggccgcaagctgatttccttcaccgac
agccgccaaggcacggcacgcattgcggtcaagctacagcaggactctgagcggaacaga
attcgcgggttgatttatcagcgccttctacaggcccaacccgctgcggccatgtcagag
gaggaactacaggacttccatgatctgcaggcacgtgcagcctcacaaacgcttgaccgc
tatgcgcagaaatatctggagcaactgcaggagaagcaagctgagacggccaagggcacc
gaaatccgctggaccgatatggtcaaccatctggccagcaccccggatctgcaactgggc
attctggactactaccacggcctcgcccccaaaacttttggcaagcaagacagtatcgcc
ttggccaaaatgctgctcgcccgtgagttcttccgcagacccaaacgcgccaacagtctg
gaaaccctaggactggtacaggtgtgctatcccaagctgaccaacatcaccaccaaaccc
atggcctggcctgcgcacctggatgtcgaatcctggcgcacctacctgaaagtactgctg
gatttcttcgtccgccaaaacgccatcctgaatatcgataaacaatggcaatcactgatc
ggcattcgtatcagccccaagtgggtggtagctccggtttctgatggcaagcctgacagg
ctgcctggtcgttacgcacgttggcccacggtaaataccgtcagcagcgcccaatcacgg
gctatcctgctgctctgcaaggcgttcaactggtcaaccgcggctcatcaggatcaaata
gactcgatcctacgtgacgcttggcaagcactcacccagcaggcaaagctgctgatttcc
tcgggtgatggctatcagctcgacctcaatgatctgagcttccggctgcccactgaagtc
tatctctgcccggtatcgcggcgcttcatcgacactccgttcgagcagctaagcccgtat
acgccacgtaccgaccgcgcgatggtcgtcaaagtgacaccctacaccctgccgcgtccc
ccagaagacctcctgcatctgccgggtgatgacggcctgttggcgactcgtgactggctc
aacacccagccggaaatccagcagctgcgccaggagtctctctggtctgacgtcatggat
ctggttatcgagggcggcaactacttccatgcggccgagcactcggcccaacaaccgaag
cacaaactggacacctacgaaagcatgttcaaggcaggcaagctgaacctgctgagctgt
tcgaccaccatggaaatgggggtggatatcggcggcatcagcgtagtggccatgaacaac
gtccccccgcacccggccaactacctccaacgcgcgggacgagctggtcgtcgtcgtgaa
ggacgatccctagcgctagccgtttgtaagaacaccccgcacgatcagagtgtgttcaat
aaccccctctggcccttcagcacgcccatgcgcatgcccaaggtttccctgcaaagccct
gagctggtacagcgtcatatcaacgcctggctgctctcgcactggctgaaacacgttgtt
gccgcccaggaaatcaagtcgatgacggcaggcgcattcttcctcgacggcgaaatgcct
atgtcgctggccaagcgtttctgcctgtggtgcaacaatcaggcaagcgaagccgagcca
caggtagtacaagccatcaaggacattactcgacgcagtattctcgactccgcgccgcag
cctgaactgctgaagcgcgccagcagcagtctcactgagatcatgcaggcatggcggcaa
gagcatgaggcaagccattctcaactgttgcaaattgccgacaagaaagccgtcgcgtcc
cgcgccatggaggcccaactcagccgtatcgagaaggagtatctgctcagcgagctggct
gaccggcgattcctacctggctatggtttcccaaccgatatcgtcagtttcgataaccgc
tgcatgcagaccttgaagctggaggaagtcgataagcgcgaggacaaccgcgcacgatat
cgctcgctggcttcccgcgatcgcgtcaccggcctgcgcgagtatgcacctggcgccgaa
ctagtcatggacggactggtgtacaagtcctccggcattacgctgaactggcatgcaccc
gcctccgccgaaggcatcaaggaactacaactcttcaagaaggcttggcgctgcgggcat
tgcggcgccagcgacacggccatcaaccccggactggagatcaactgccaggactgcggc
gctccgatcgagcgggacgagattcgcgaatacttggtgccagcaggctttgctgtggac
ttcttcgatgagccgcataacgatatcagccgcctgcagtatgtaccggtcaaagctccg
tggctgaatgtgccctccagctgggtctgcctggccaacccggcactcggccagttccgc
tccagccagcaggcccacctgttccactacacgtcgggggccaatcagcagggcttcgcc
atctgtctagagtgcggcaaggctgagcccatgctcagccaccccgatacatccgcccct
gccaatgagcagtatctaccggccattttccgccagaaggcacagcacagacgtctgcgc
ggcggcaagaacgacgacgggggaaacatctgccccggcagccagaacagttggaagatc
aagcagggcatccacctcggccatgacagcctgaccgatgcgctggagttggtactgcgt
accccctccaatggtgaactgctgaacgatgacatcaccggctattcgattgccgtggcg
ctgcgggaagcaatagccgccgaactgggcgtgcagaccgaagagctaggctgcgattgc
cacccgattagggtcgaaggctctccaacccgagccatcaggattttcgacctacgcagt
ggcggctatacctctcaggcggcagaacggctgaatgactccagcctgtggcagcgggtc
atcacgcgcctggacagctgcaactgctcccatgcctgccagcgctgcctgctcagcttt
gatacccgctttgaggctgatcgcctcaatcgccacgctgcactggagtggatcaaccag
acctggcttaccggcttagagttgccccctgagctagcagtcttgggttcacaaagtcag
gcggaaattaccaccctgctggaagcggtcgaacgagcgattacccaagatgacaacgcg
aagaccgttacggtctacctcgcggctcccgccgaagactgggatcttgccgtcgcccgc
cgcctgcggcatcaactacagaactgggaagacgccggacaccaagtgcaactgcatctg
ctggaaagcaccttcgccgctctgccttccgaccagagggaatggctcgcaaaactgtcc
ttcaacgggattcagatctgcttgcacaaggccatgccagatctcggagtgctggcgctg
aacatcaccgtacatggggcgcgaagcaacttcgcctgggccagcgacaatgcgaacctg
gccgcacctggccgcacctgggatctggcggcagccggggtgcggatcattcggggcgta
ccccccaccctgaaacctgagcgcgtactggataccagcgatttgttgccgcctgcaccc
cagggcttggttaaggtcgagatcggtaatcatctggatggttcgctcgacggctttgct
cgtcggctctgggagcacctaaggcaggaggccggaagccttgtggctgatgccatcaca
ggccaagatccgatcatcgagttggtctacagcgaccgctatgtatgcagcccgctggtc
gtgaatctgcttgtcaatatgatccatgagatcggagcgcatagcgatgaaggctttgcc
attaggattcaggggcgtaagtaccagaaggatgacaaccgctcaccttggcagtgtcgg
cacgattggcgcacatctcaagagcgcgatcacgcgatccgtcaggcgttggagtattgt
ggcctggaagccgatgtcctcagccttccggctttgccgcactaccgccagttgcaactg
cagttgcgctctggcaaacaattgaccatccagtttgatcaggggctttcgtattgggag
gccgagcgtagtgcaaagccttatctgctcaggttcgatttctcatcacctcagcttgga
gaaaaaatcatgacgcgcatccagtgcagagtattggcggccagtgatgaaaacacccag
atattcatttcatccacaggatgctctaacggctag
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