Pseudomonas benzenivorans: SBP02_18975
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Entry
SBP02_18975 CDS
T10569
Symbol
dgcB
Name
(GenBank) dimethylglycine demethylation protein DgcB
KO
K21834
N,N-dimethylglycine/sarcosine dehydrogenase ferredoxin subunit
Organism
pbez Pseudomonas benzenivorans
Pathway
pbez00260
Glycine, serine and threonine metabolism
pbez01100
Metabolic pathways
Module
pbez_M00975
Betaine degradation, bacteria, betaine => pyruvate
Brite
KEGG Orthology (KO) [BR:
pbez00001
]
09100 Metabolism
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
SBP02_18975 (dgcB)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF3483
CCG
Fer4_8
Fer4_10
Fer4_17
Fer4_9
Fer4_16
Fer4
Fer4_2
Fer4_7
Fer4_6
Fer4_18
Fer4_21
Fer4_4
Tla3_C
Fer4_22
Motif
Other DBs
NCBI-ProteinID:
WPC04814
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Position
4096189..4098150
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AA seq
653 aa
AA seq
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MLNTLLPILLFAALALAVLGAAKRFLMWRRGKPAQVDWIGGLLAMPRRYLVDLHHVVERD
KYMSKTHVATAGGFVLAAVLAILVHGFGLHNRILGFALLAATVLMFVGALFVAKRRKNPP
ARLSKGPWNRLPKSLLMFSVSFFIATLPVAGILPADFGGWVLAVILAVGVAWGVSELFFG
MTWGGPMKHAFAGALHLAWHRRAERFGGGRSSGLKALNLDDVSAPLGVEKPTDFTWNQLL
GFDACVQCGKCEAMCPAFAAGQPLNPKKLIQDMVIGLAGGNDAKFAGSPYPGIPLGEHGG
GPHQPIVVQGGKGLVEADTLWSCTTCRACVEECPMMIEHVDAIVDMRRHLTLEKGATPNK
GAEVLDNLIATDNPGGFAPGGRLNWAADLNLALMSEKKEAEVLFWVGDGAFDMRNQRTLR
AFVKVLKAADVDFAVLGLEERDSGDVARRLGDEATFQTLAKRNIATMSQYRFKKIVTCDP
HSFHVLKNEYGALGGHYEVLHHSTYMEELISGQKLSLGQHKGGSVTYHDPCYLGRYNGEY
EAPRSVLKAIGIEVKEMERSGFRSRCCGGGGGAPITDIPGKQRIPDMRMVDIKETGAELV
AVGCPQCTAMLEGVVAPRPEIKDIAELVADVLLEAPAPAKKPAPTKPEALEVH
NT seq
1962 nt
NT seq
+upstream
nt +downstream
nt
atgttgaacacccttctccccattctgctgttcgccgccctggcgctggccgtgctcggc
gccgccaagcgcttcctgatgtggcgccgcggcaagccggcccaggtcgactggatcggc
ggcctgctggccatgccgcgccgctacctggtcgacctgcaccacgtggtcgagcgcgac
aagtacatgtccaagacccacgtggccaccgccggcggcttcgtcctggccgccgtgctg
gcgatcctggtgcacggtttcggcctgcacaaccggattctcggcttcgccctgctggcc
gccacggtgctgatgttcgtcggtgcgctgttcgtcgccaagcgtcgcaagaatcccccg
gcgcgcctgtccaagggcccatggaaccgcctgccgaagagcctgctgatgttctcggtg
agcttcttcatcgccaccctgccggtggccggcatcctcccggccgacttcggcggctgg
gtcctcgccgtgattctcgcggtcggcgtggcctggggcgtgtccgagctgttcttcggc
atgacctggggcgggccgatgaagcacgcattcgccggcgccctgcacctggcctggcac
cgccgcgccgagcgcttcggcggcggccgttcgagcggcctcaaggcgctgaacctggac
gacgtgtccgcgcctctgggcgtggagaaacccaccgacttcacctggaaccagctgctc
ggtttcgacgcctgcgtgcagtgcggcaagtgcgaggccatgtgcccggccttcgccgcc
ggccagccgctgaacccgaagaagctgatccaggacatggtcatcggcctggccggcggc
aacgacgccaagttcgccggcagcccctacccgggcatcccgctgggtgagcacggcggc
ggtccgcaccagccgatcgtggtccagggcggcaagggcctggtggaggccgacaccctg
tggtcctgcaccacctgccgggcctgcgtcgaggagtgcccgatgatgatcgagcacgtc
gacgccatcgtcgacatgcgccgccacctgaccctggagaagggcgcgaccccgaacaag
ggcgccgaggtgctggacaacctgatcgccaccgacaaccccggcggcttcgccccgggc
ggccgcctgaactgggcggcggacctcaacctggcactgatgagcgagaagaaggaagcc
gaggtgctgttctgggtcggtgatggcgccttcgacatgcgcaaccagcgcactctgcgc
gccttcgtcaaggtgctcaaggccgccgacgtcgacttcgccgtgctcggcctggaagag
cgcgacagcggcgacgtggcccgccgcctgggcgacgaggcgaccttccagaccctggcc
aagcgcaacatcgccaccatgagccagtaccgcttcaagaagatcgtcacctgcgaccca
cacagcttccacgtgttgaagaacgagtacggcgccctcggcggccattacgaagtcctg
caccacagcacctacatggaagagctgatcagcgggcagaaactcagcctcggccagcac
aagggcggcagcgtcacctaccacgacccctgctacctgggccgctacaacggcgagtac
gaggcgccgcgcagcgtactcaaggccatcggcatcgaggtcaaggaaatggaacgctcc
ggcttccgctcgcgttgctgcggcggcggcggcggcgcgccgatcaccgacatccccggc
aagcagcggattcccgacatgcgcatggtcgacatcaaggaaaccggcgccgaactggtc
gccgtgggctgcccgcagtgcaccgcgatgctcgaaggcgtggtcgcgccgcgcccggag
atcaaggacatcgccgaactggtcgccgacgtgctgctggaggcccccgccccggcgaag
aagccggcgcccaccaagcctgaagccctggaggtgcactga
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