Candidatus Promineifilum breve: CFX0092_A0577
Help
Entry
CFX0092_A0577 CDS
T05438
Name
(GenBank) Ribonuclease II
KO
K01147
exoribonuclease II [EC:
3.1.13.1
]
Organism
pbf
Candidatus Promineifilum breve
Brite
KEGG Orthology (KO) [BR:
pbf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pbf03016
]
CFX0092_A0577
Enzymes [BR:
pbf01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.1 exoribonuclease II
CFX0092_A0577
Transfer RNA biogenesis [BR:
pbf03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
CFX0092_A0577
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNB
HTH_RNase_II
RNase_II_C_S1
Motif
Other DBs
NCBI-ProteinID:
CUS02444
UniProt:
A0A160SZ93
LinkDB
All DBs
Position
I:644423..646273
Genome browser
AA seq
616 aa
AA seq
DB search
MNPSVDSLVLYKGQPAVVRQAAAKKLTIELAGGERVSVRPKDVALLHPGPVAHLRQLPPA
IGDPLTAWELLQGQATTLPELAELSFGSYTPATAWAAWTVVADGLYFIGDPEAITAHTAE
EVAKIQAAREAKAADERDWDAFATRVADGRVVLEDERYLADVIALAVGRAEASRTLRRLG
RPQTPESAHTLLLSVGRWQPADNPYPARLAVPTEPVADTIVAAAQQAQLPDETRRDLTHL
LALAIDDEGSSDPDDALSLDEGRLWVHVADVAALVTPDDAVDREARGRSANLYLPDGTIH
MLPEELTARLALGLQPVSPALSLLLAPQPDGDFELLEIVASWVRVTRLSYEQAETLLDES
PYDALAAVAAANRARRIANGAVEIDLPEVKIKAALDGMVTIRPLPSLGSRALVREAMLMA
GEAVGRLAMAQNIPLAFTAQDSPQSDDGLPADLTGAGMSIMWAKRRSMQRSRPSTAPGRH
AGLGLDVYVQATSPLRRYLDLLAHQQLRAHLRGAPLLDTAAVTLRIGTADAVAGAVRAAE
RQSNQHWTLVYLLQHPDWQGEGVVVEQKQGRDVVVIPALAWETELYRRPSRPLDSVVTLA
VESVDLPNRTARFRVV
NT seq
1851 nt
NT seq
+upstream
nt +downstream
nt
gtgaatccgtctgtcgatagtctggtactctataagggtcagccggccgtcgtgcggcag
gcggcggccaagaagctgaccattgagctggccggcggcgaacgggtcagcgtgcggccc
aaggatgtggccctgctccaccccggccccgtggcccatctccgccaactgccgccggca
atcggcgacccgctgaccgcctgggaactgctccagggccaggcgacgacgctgccggaa
ttggccgagctgtccttcggtagttatacgccggcgacggcctgggcggcctggaccgtg
gtggccgacgggctttacttcatcggcgaccccgaggccatcacggcgcatacggccgag
gaagtggccaaaatccaggccgcgcgcgaggccaaggccgccgatgagcgcgattgggac
gccttcgccacgcgagtggccgacggccgcgtcgtgctcgaagacgaacgctatctggcc
gacgtgatcgccctggccgtggggcgggccgaggccagccgcaccctgcgccgtctgggc
cggccgcagacgccggaatcggcccataccctgctgctgagcgtcggccgctggcagccg
gccgataacccctatccggcgcgcctcgctgtgccgaccgaacccgtcgcggacacgatt
gtcgccgcagcgcaacaagcccagctgccggacgaaacgcgccgcgatctgactcatctc
ctggccctggcaatcgacgacgagggcagtagcgaccccgacgacgccctgtcgctggat
gagggccggttgtgggtccacgttgccgacgtggccgccctggtgacgccggatgatgcc
gtcgatcgcgaagcccgcggccgctcggccaacctctatctgcccgacggcacgatccac
atgctgccggaggagctgaccgcccggctggccttgggcctccaacctgtgtccccggcg
ctatctctattgttggcgccacaaccggatggcgattttgaattgttggaaatcgttgcc
agttgggtgcgcgtcactcgcctctcctacgagcaggccgagaccctgctggacgaaagc
ccgtatgatgcgttagccgccgtggccgcggccaatcgcgcccggcgcattgccaacggc
gcggtggaaatcgatctgccggaagtcaagattaaggccgcgctggatgggatggtcacc
atccgccccctgccgtcgttgggcagccgggcgctggtgcgcgaggcgatgctgatggcc
ggggaagccgtcggccgtctggcgatggcccagaatatccccctggccttcaccgcccag
gattcgccgcagagtgacgacggcttgccggccgatctgaccggcgccgggatgtcgatc
atgtgggccaagcgccgctcgatgcaacgcagccggccctcgaccgcccccggccgtcat
gccgggttgggtctggacgtgtacgtgcaagccaccagcccgctacgccgctacctggat
ctgctggcccaccaacagttgcgcgcccatctgcgcggcgcgccgctattggacacggcg
gcggtcacgctgcgcatcggcacggccgacgccgtggccggggccgtgcgcgccgccgag
cgccaatcgaaccaacattggacgctggtctacctgctacagcaccccgattggcagggt
gagggcgtcgtcgtggagcagaaacaggggcgcgacgtggtggtgataccggcgttggcc
tgggagacggagctataccggcggccgtcgcgtccgctggacagtgtggtgacgttggcg
gtggagagcgttgacttgcctaaccggaccgcccgtttcagagtggtctag
DBGET
integrated database retrieval system
