Candidatus Promineifilum breve: CFX0092_A0956
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Entry
CFX0092_A0956 CDS
T05438
Symbol
priA
Name
(GenBank) Primosomal protein N
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
pbf
Candidatus Promineifilum breve
Pathway
pbf03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pbf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
CFX0092_A0956 (priA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pbf03400
]
CFX0092_A0956 (priA)
Enzymes [BR:
pbf01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
CFX0092_A0956 (priA)
DNA repair and recombination proteins [BR:
pbf03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
CFX0092_A0956 (priA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PriA_3primeBD
DEAD
PriA_C
ResIII
Zn_ribbon_PriA
Helicase_C
Motif
Other DBs
NCBI-ProteinID:
CUS02834
UniProt:
A0A160T063
LinkDB
All DBs
Position
I:complement(1095863..1098859)
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AA seq
998 aa
AA seq
DB search
METGRFAEVVVNVETPLSDAYHYHIPADLRPALAIGHLVEVEFGRRLAQGIIVGFADSAP
VEETKPVISLIDPEPVLWPWQIELARWLSRRYMAPLNACFRLLLPPGLTRWADSIYDINP
RWDGEGKLTELQQRLVDLLLERGDQRGRQIARHLKDKKWTAAATQLTNRGILRRASVLDP
PRVRPKQVRTVELIAGPARIRAAAPRLGRATKAAAVLAYLADAADPLPAEADVLDATGAT
IKHLDALAAAGLITRSPAAEVVVPISRAKAPPELLAVRPRLPLAPDALPRPELLPGWLAA
GLVRVEAQPATVSLAVPARRVTGHILRLGRAEVYGRILDYLADEARAVALSDVYATTGAT
LYHLRKLVALDLVRLGDEHVWRDSLADRDFAPADPPELTLDQARVWGRIKVAMIQDEADD
EDDEPFDDDDEPDTTTGDEVDPLDAATPFLLHGVTGSGKTEIYMRAIDYALARGQRAIML
VPEIALTPQTVRRFAARFPGRVAVLHSALSDGERYDTWRRARAGLFDIAIGPRSALFAPL
PNLGVIVLDEEHDSSYKQTPPVPPPYYHAREAAIALGAFTGAAVILGSATPDVVTYHRAR
SGRYQLLELPKRIMGHRRRIEDQAGRLNVLSRYQPLTDGGDGDGGDIMRLDEALTIPLPP
IQVTDMRQELRAGNRSVFSRALELAVSETLARGEQAILFLNRRGTATFVNCRDCGHVMNC
PRCGIPLTYHQPRMMLVCHQCARREPHPHVCPNCGSDRIRYFGLGTERLQELVRERWPEA
RLVRWDRDTTGEEGSHEALLAGFINRESDILVGTQMIAKGLDLPFVTLVGVISADIALGL
PDYNTGERVFQVLAQVAGRAGRGLLGGRVIIQTYNPEHYAVRAAAEHDYAAFYLDEMRFR
TQRALPPFRRIVRLLVSDPVNDRAEEMARDMARVLNLAVRERSLAATDVLGPTPAFFTRL
DGRYRWHIVVHTPDPHRLLDDLPIPRPWVVDIDPESTL
NT seq
2997 nt
NT seq
+upstream
nt +downstream
nt
atggaaaccggccgctttgccgaagtcgtcgtcaacgtggagacgcccctctccgacgcc
tatcactaccacatcccggccgacttacgaccggcgttagccatcggccacctggtcgaa
gtggagttcggccgccgcctggcccagggcatcatcgtcggtttcgccgacagcgccccg
gtcgaagagaccaagccggtcatctcgctcatcgaccccgagccggtgctgtggccgtgg
cagatcgagctggcccgctggctcagccgccgctacatggccccgctcaacgcctgcttc
cgcctgctgctgccgcccggcctgacgcgctgggccgatagcatctacgatatcaatccc
cgctgggacggcgagggcaagctgaccgagctacagcagcgtctggtcgatttgctgctc
gaacggggcgatcaacgcggtcgccagatcgctcgccacctgaaggacaagaaatggacg
gccgcggccacccaactgactaaccggggtattctgcgccgcgcctcggtgctcgatccg
ccgcgggtgcggccgaagcaggtgcgcaccgtcgaactgatcgccgggccggcccgcatc
cgcgccgccgcgccccggttgggccgcgccaccaaggcggcggccgtgctggcctacctg
gccgacgcggccgacccactaccggccgaggccgacgtgctggacgccaccggagctacg
atcaaacacctggacgcgttggccgccgcggggctgatcacccgtagcccggcggccgaa
gtcgtcgtgcccatctcgcgggccaaggccccgccggaactgctggccgtccggccgcgg
ttgccgctggctccggacgcgctgccccgaccggaactgttgccgggctggctggccgcc
gggctggtgcgcgtcgaggcccagccggcgacggtcagcctggccgtgccggcgcggcgg
gtcacgggtcacatcctgcgcctggggcgggccgaggtatatggccgcatcctcgattat
ctggccgacgaagcgcgggccgttgctctcagcgacgtgtatgccactacgggggcgacg
ctgtaccatctgcgtaagctggtcgcgctggatttggtgcggctgggcgacgaacacgtc
tggcgcgactcgctggccgaccgcgacttcgccccggccgacccgccggagttgaccctc
gatcaggcccgcgtctggggccgcatcaaggtcgccatgatccaggacgaggccgacgac
gaagatgatgagccgttcgacgacgacgacgagccggacacgaccactggcgatgaagtc
gatccgctagatgccgcaaccccattcctgctccacggcgtcaccggcagcggcaagacc
gaaatctacatgcgggccatcgactacgccctggcccgcggccaacgggcgattatgctc
gtgccggagatcgccctgacgccgcagacggtgcgccgctttgccgcccgttttcccggc
cgcgtggccgtgctccatagcgccctcagcgacggcgaacggtacgacacctggcggcgc
gcccgcgccggactgttcgatatcgctatcgggccgcgcagtgccctgttcgcgccgctg
cccaatctgggcgtcatcgtgctggacgaagagcacgacagcagctataagcagacgccg
cccgtgccgccgccctactaccacgcccgcgaggcggccatcgccctgggagccttcacc
ggcgcggcggtcatcctgggcagcgccacgcccgacgtggtgacctaccaccgggcgcgc
tccggccgctaccagttgctggaactacccaagcgcatcatgggccaccggcggcgtatc
gaggatcaggccgggcggctcaacgtgctcagtcgctaccagccgttgacggatggcggc
gacggcgacggcggcgacatcatgcgcctggacgaggccctgaccatccccctgccgccc
attcaggtgaccgacatgcgccaggagttgcgggcgggaaaccgctccgtctttagccgg
gcgctggagttggccgtcagcgagacactggcccgcggcgagcaagcgatcctcttcctg
aaccggcgcggcacggcgaccttcgtcaattgccgcgactgcggccacgtgatgaactgc
ccgcgctgcggcatccctctgacctaccaccagccgcgaatgatgctggtttgccaccag
tgcgcccggcgtgagcctcacccccacgtctgtcctaattgcggctcggatcgcatccgc
tactttgggctgggcaccgagcggctacaggagttggtgcgcgagcgctggccggaggcg
cggctggtgcgctgggatcgcgacaccaccggcgaggaggggtcgcacgaggcgctactg
gccgggttcatcaatcgcgagtccgacatcctggtgggcacgcagatgatcgccaagggg
ctggacttgccgtttgtgacgctggtcggggtcatttcggccgacatcgccctgggcttg
cccgactacaacaccggcgagcgcgtcttccaggtgctggcccaggtggcggggcgggcc
gggcgcggcttgctgggcgggcgggtcatcatccagacctacaacccggagcattacgcc
gtgcgggccgcggccgagcacgattacgccgcgttctatctggacgagatgcgctttcgc
acccagcgcgcgctgccgccgtttcggcgtatcgtgcgcctgctggtgagcgatccggtg
aacgaccgggctgaggaaatggcccgcgacatggcccgcgtgctgaatctggccgtgcgc
gagcggtcgctggccgccaccgacgtgctggggccgacgccggccttcttcacccggctc
gacggccgctaccgctggcacatcgtcgtccacacccccgacccccatcgcctgctggat
gatctgcccatcccccggccctgggtggtggacatcgacccggaaagcacgttataa
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