Candidatus Promineifilum breve: CFX0092_A0976
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Entry
CFX0092_A0976 CDS
T05438
Name
(GenBank) putative ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
pbf
Candidatus Promineifilum breve
Brite
KEGG Orthology (KO) [BR:
pbf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pbf03016
]
CFX0092_A0976
Enzymes [BR:
pbf01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
CFX0092_A0976
Transfer RNA biogenesis [BR:
pbf03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
CFX0092_A0976
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
HRDC
LysM
Motif
Other DBs
NCBI-ProteinID:
CUS02854
UniProt:
A0A160T077
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All DBs
Position
I:1121220..1122371
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AA seq
383 aa
AA seq
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MTPDAHNQPPLAPFRYVAGRAAWQACLRDLQAAPRLAIDLEANSMFAYRERACLIQISTA
NADYILDPLADLDFSPLGVIIANPAVEKIFHAAEYDLILMGRDYGWQLSNLFDTMWAARI
LGYQQIGLANLLDKYFGLHISKRFQKANWCHRPLSAGELAYAQKDTHYLPALRDRLAAEL
DARGHTVEAAEIFAEQTHVRLPDNGFDPDGFWHINGAYDLAPAEQAVLKALYLFREREAK
RRDAPHFKVLSDRTLLELATTAPTRTADLGRIHGMSEGQQQRYGRNILHVIAEAADAPPP
QPPKRQPRLPEAVLNRYDLLHRWRKARAQARGVESDVVMSRDSLWAIAKANPRTLDELQA
LNTLGPWRLATYGDELLRIGARD
NT seq
1152 nt
NT seq
+upstream
nt +downstream
nt
atgacgccggacgcgcataaccagccgcccctggcccccttccgttacgtggccggccgc
gccgcctggcaggcgtgcctgcgcgacctgcaagccgcgccccgtctggccatcgacctg
gaggccaacagcatgttcgcctatcgcgagcgcgcctgcctcattcagatctccaccgcc
aacgccgactacatcctcgatcccctggccgacctcgacttcagcccgctgggtgtcatc
atcgccaaccccgccgtggagaagatcttccacgccgccgaatatgacctgatcctgatg
ggccgcgattacggctggcagctcagcaatttattcgacacgatgtgggcggcgcgcatc
ctgggctaccagcagatcgggctggcgaacttgctggacaagtatttcggcctgcacatc
agcaagcgcttccagaaagccaactggtgccaccggccgctctcggccggcgaactggcc
tatgcccagaaggatacccactacctgccggcgctgcgcgaccggctggcggccgaattg
gacgcccgcggccacacggtggaggcggccgagatattcgccgagcaaacccacgtgcgc
ctgcccgacaacggcttcgaccccgacggcttctggcatatcaacggcgcctacgatttg
gccccggcggagcaggcggtgttgaaggcgctctacctcttccgcgagcgcgaggccaaa
cggcgcgacgcgccccatttcaaggtgttgagcgaccgcacgttgctcgaattggcgacg
accgcacccacgcggacggccgacctggggcggattcacggcatgtcggaggggcagcaa
cagcgctacggccgcaacatcctccacgttatcgccgaggccgccgacgcgcccccgccc
cagccgcccaaacgccagccgcgcctgcccgaggccgtcctcaaccgctatgacctgctg
caccgctggcgcaaggcccgcgcccaggctcgcggcgtggaatcggacgtggtgatgagc
cgtgattcactgtgggccatcgccaaggccaacccgcgcaccctcgacgagttgcaggcg
ctcaacaccctcggcccctggcgtctggcaacctatggcgacgaactactaagaataggg
gctagggactag
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