Candidatus Promineifilum breve: CFX0092_A1003
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Entry
CFX0092_A1003 CDS
T05438
Symbol
pcrA
Name
(GenBank) ATP-dependent DNA helicase PcrA
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
pbf
Candidatus Promineifilum breve
Pathway
pbf03420
Nucleotide excision repair
pbf03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
pbf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
CFX0092_A1003 (pcrA)
03430 Mismatch repair
CFX0092_A1003 (pcrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pbf03400
]
CFX0092_A1003 (pcrA)
Enzymes [BR:
pbf01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
CFX0092_A1003 (pcrA)
DNA repair and recombination proteins [BR:
pbf03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
CFX0092_A1003 (pcrA)
MMR (mismatch excision repair)
Other MMR factors
CFX0092_A1003 (pcrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PcrA_UvrD_tudor
UvrD_C_2
AAA_30
Viral_helicase1
AAA_22
AAA_11
ResIII
SRP54
LRV
AAA_16
Motif
Other DBs
NCBI-ProteinID:
CUS02881
UniProt:
A0A160SZ92
LinkDB
All DBs
Position
I:1148754..1151060
Genome browser
AA seq
768 aa
AA seq
DB search
MDLLANLNEAQRAAVSAPAGALLVVAGPGSGKTRVLTHRIAYLIREMRVSPWHIMAVTFT
NKAAREMEHRIEQLLDGRPQGLNMGTFHAICARLLRREVDTLTHYQRDFVIFDTADQLQV
IKQALAELNLDDKKFPPNKMLNGISNAKNDLITPAEYVATNYTGAAVQRVYERYQMTLRV
NNAMDFDDLMMNVVLLFDEQPEVMARYQERYHHVLVDEFQDTNATQYRLLRQLTGDHNSI
FAVGDSDQSIYKWRGADYRNIQNFYRDYPASRTILLEQNYRSTQVILDAAIEVIRHNRDH
IPKKLFTERPGGTKISLREAYNESDEAATIVDTIESLMLKNRNGNDFAVMYRTNAQSRAI
EEAFVQAGLPYRLVGATQFYQRREVKDIIAYLRLIHNPLDAVSFNRVLNVPTRGIGQQTQ
AQFNAWAAAGGRQPAEALLRLATDPDAQHPFTGRAYKALYQFGSLYAAWRTLSERVSVGE
LLDAVLEQINYRAYLEDGTEEGEDRWANVMELRGVAGVDSQMALGDFLQQVSLVAETDNL
DSEAQATTLLTLHAAKGLEFPVVFITGLEEGLLPHSRSMDDEDELAEERRLFYVGLTRAK
DAIYLSHAFRRTSWGDSSVAVPSRFLSDLPDALVDGQRPGNRRRESIDRMSTWGDKPRTS
GGRPTSPSTSSGDRRPPVTNNVWGNSSGRPAQDERRLPPPNTAGDPPRRERPVSARYKTG
QKVRHAKFGDGTVIETKVTGSDEEVVVAFPGLGIKRLAASIAALEIIE
NT seq
2307 nt
NT seq
+upstream
nt +downstream
nt
atggatttgcttgcgaacctaaatgaagctcaacgggccgccgtcagtgccccggccggc
gcgctcctggtcgtggccggccccggcagcggcaagacgcgcgtcctcacccatcgcatc
gcctacctcatccgcgagatgcgcgtatcgccctggcacatcatggccgtcaccttcacc
aacaaagcagcgcgggaaatggagcaccgcatcgagcagctgctcgacggccgcccgcaa
gggttgaacatgggcacgttccacgccatctgcgcccgcctcctgcgccgcgaggtggac
accctgacccattaccagcgcgatttcgtcatcttcgacaccgccgaccagttgcaggtc
atcaaacaggccctggccgaactcaacctcgacgacaagaagttcccgccgaacaagatg
ctcaacggcatcagcaacgccaagaacgatctcatcacccccgccgaatacgtggcgacc
aactacaccggcgcggccgtccagcgcgtctacgagcgctaccagatgacgctgcgggtc
aacaacgccatggacttcgacgacctgatgatgaacgtcgtgctgcttttcgatgaacag
cccgaggtcatggcccgctatcaggagcgctaccaccacgtgctggtggacgaatttcag
gataccaacgccacccagtaccgcctgctgcgccaactgacgggcgaccacaacagcatc
ttcgccgtcggcgactccgatcaatcgatctacaagtggcgcggcgcggattaccgtaac
atccagaacttctaccgcgactacccggcgtcgcggacgatcttgctggagcagaattat
cgctcgacccaggtcatattggacgcggccatcgaggtcattcgccacaaccgcgaccac
atccccaagaagctgttcaccgagcggccgggcggcacgaagatcagtctgcgcgaagcc
tacaacgagtccgacgaggcggcgacgattgtcgatacgattgaaagcctgatgctgaag
aaccgtaacggcaacgacttcgccgtgatgtaccgcaccaatgcccaatcccgcgccatc
gaagaggcgttcgtgcaggccgggctgccctatcggctggtgggggccacgcagttctac
cagcggcgcgaggtcaaggacatcatcgcctatctgcggctcatccacaacccgctcgat
gccgtcagcttcaaccgcgtcctcaacgtgccgacgcgcggcatcggccagcagacgcag
gcccaattcaacgcctgggcggccgccgggggacgtcaaccggccgaggcgctgctgcgt
ctggcgaccgaccccgacgcccagcaccccttcaccggccgggcctataaagccctctac
cagttcggctcgctctatgccgcctggcggacgctgagcgagcgggtgagcgtgggcgaa
ctgctcgacgccgtgctggagcagatcaactaccgcgcctatctggaagacggcaccgag
gaaggcgaggatcgctgggccaacgtcatggagttgcggggcgtggccggggtggacagc
cagatggcgctgggcgactttttgcaacaggtgtcgctggtggccgagaccgacaacctg
gacagcgaggcccaggcgacgacgctgctgaccctccacgccgccaaggggctggagttc
cccgtggtcttcatcaccgggctggaggaggggctgctgccccacagccggtcgatggac
gatgaggatgagctggccgaggagcgccgcctgttctacgtcggcctgacccgcgccaag
gatgcgatctacctctcccacgcttttcggcgcacgtcgtggggggatagctcggtggcc
gtgccctcgcgcttcctgtccgacctgcccgacgcgctggtcgatgggcagcggccgggc
aatcgccgccgcgagagcatcgaccggatgagcacgtggggcgacaaaccgcgtacgagc
ggcggccgtccgacgtccccctcgacctcgagcggcgaccgccggccgccggtcaccaac
aacgtgtggggcaattcatcggggcgaccggcccaggacgagcgccgtctgccgccgccg
aacacggccggcgacccaccccggcgggagcgcccggtgtcggcccgctacaagaccggc
cagaaagtgcgccacgccaaattcggcgacggcacggtcatcgagaccaaggtgaccggc
agcgacgaagaagtcgtggtcgcctttcccggcctgggtatcaagcggctggcggccagc
atcgccgcgctggagatcatcgagtag
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integrated database retrieval system
