Candidatus Promineifilum breve: CFX0092_A1051
Help
Entry
CFX0092_A1051 CDS
T05438
Name
(GenBank) Helicase RecD/TraA family protein
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
pbf
Candidatus Promineifilum breve
Pathway
pbf03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pbf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
CFX0092_A1051
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pbf03400
]
CFX0092_A1051
Enzymes [BR:
pbf01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
CFX0092_A1051
DNA repair and recombination proteins [BR:
pbf03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
CFX0092_A1051
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_19
HHH_RecD2
AAA_30
OB_YrrC
SH3_13
UvrD_C_2
HHH_5
Viral_helicase1
AAA_11
AAA_22
SLFN-g3_helicase
UvrD-helicase
PhoH
T2SSE
nSTAND3
AAA_28
NTPase_1
TrwB_AAD_bind
AAA_16
DEAD
AAA_29
AAA_7
Helicase_RecD
TrmB
RsgA_GTPase
AAA
ABC_tran
UvrD_C
Mg_chelatase
AAA_18
TsaE
NPHP3_N
cobW
SRP54
AAA_5
Motif
Other DBs
NCBI-ProteinID:
CUS02929
UniProt:
A0A160T1A9
LinkDB
All DBs
Position
I:complement(1209918..1212206)
Genome browser
AA seq
762 aa
AA seq
DB search
MGDRAEVSGSIERVTYYNEESGYTVLRLRPDTRGMLPYAYGEQLLTVVGNLPEVNPGEWL
KLTGQWLMHPKHGRQFQVEQCEQSVPASVEGIKRYLGSGMVRGVGKVMAERIVNRFGADT
LTIIDENPQRLGEVLGIGRKRVDNVIKAWAEQRAIKDVMIFLQGHGISTHLAVKIYKQYG
DASLAVVQATPYRLVQDIHGIGFKTADKIAQALGLSPDDPARIEAGIHYTLSKMADDGHV
YAPQDELEPEAAEILQLPAERVTAVLESLENSELVRRETIVYQTADDRRQTTAGKSTNGG
DAVMREERAVYLPALYHSETGLTRQVKRLVEHPTSRLSGLRGGFVQAPLLDKGAGGRVAT
NPLTPQQEQAVNAAVSHKLTILTGGPGTGKTTTLNNLLNLLDATGHTYALASPTGRAAKR
MTEATGREARTIHRLLEFKPGEGFGRNENHPIDADLIVIDESSMLDLVLAYNLLRAIGSD
SHLLLVGDVDQLPSVGAGDVLRDLIESGVAAVVRLETIFRQAADSLIIRNAHRINRGLMP
ETTADGADSLPSDFYIFIKEDPGETADLLVDIVAKRAPTKFGLDPFDDIQVLAPMYNGLA
GVTRLNGLLQEALNPPGGRKIERRISGRTFRVGDKVMQTVNNYDKSVYNGDIGRITAIDV
IEQTMTVAIDGAPVVYSFLEVDELIHAYAVSVHKSQGSEYPCVVIPVVVQHYLMLQRNLL
YTAITRARKLVILVGTRRAIQIAVRTNPVVERHTALDWRLKK
NT seq
2289 nt
NT seq
+upstream
nt +downstream
nt
atgggcgatcgcgcggaagtgagcggctccatcgagcgcgtcacgtactataacgaggag
agcggctacaccgtgttgcggctgcggcccgacacgcgcgggatgctgccctacgcttac
ggcgagcaactgctgaccgtcgtcggcaatctgcccgaagtgaaccccggcgaatggctg
aagctgaccgggcaatggctgatgcaccccaaacacggccgccagttccaggtggaacag
tgcgagcaatccgtgccggcctcggtcgagggcatcaagcgctatctcggttcgggcatg
gtgcgcggcgtgggcaaggtgatggccgagcgcatcgtcaaccgcttcggggccgacacg
ctgaccatcatcgatgagaatccgcaacggctgggcgaggtgctgggcatcggccgcaag
cgggtcgataacgtcatcaaagcctgggccgagcagcgggccatcaaggacgtgatgatt
ttcctgcaaggtcacggcatctccacccatttggcagtcaagatctacaagcaatacggc
gacgcgtcgctggccgtcgtccaggccacgccctaccggctggtgcaggacatccacggc
atcggcttcaagacggccgacaagatcgcccaggccctggggctctcgcccgacgacccg
gcgcgcatcgaggccggcatccactacaccctgagcaagatggccgacgacggccacgtc
tacgcgccgcaggacgaactggagccggaagcggccgaaattctgcaactgccggccgaa
cgggtgacggccgtgctggaatcgctggagaacagcgaattggtgcggcgggagacgatt
gtgtatcagaccgcggacgacagacggcagaccacggccggaaaatcaacgaatggcggg
gacgccgttatgcgcgaggagcgggcggtgtatctgccggccctctaccactccgagacg
gggctgacgcggcaggtgaagcggctggtggagcatccgacgagccgcctcagtggattg
aggggcggctttgtccaggcccctttgctcgacaagggcgcgggcggccgggtcgccacg
aacccgctgaccccccagcaggagcaggccgtcaacgccgccgtcagccacaagctgact
atcctgaccggcgggccgggcacgggcaagacgacgacgcttaacaacctgctcaacctg
ctggacgccaccggccatacctacgccctggcctcgcccaccggccgcgcggccaaacgc
atgaccgaggccaccgggcgcgaggcccgcaccatccaccgcctgctggagttcaagccg
ggcgagggcttcggccgcaacgaaaaccaccccatcgacgccgatctgatcgtcatcgat
gagtcgtcgatgctcgatctggtgctggcctataacctgctgcgggccatcggttccgac
agccacctgctgctggtgggcgacgtggatcagttgccgtccgtcggcgcgggtgacgtg
ctgcgcgacctgatcgagtcgggcgtggccgccgtggtgcggctggagacgatcttccgc
caggcggccgactcgctcatcatccgcaacgcccaccgcatcaatcgcggcctgatgccg
gagacgacggccgatggggcggactctttgccgagcgacttctacatcttcatcaaggaa
gaccccggcgagacggccgacctgctggtcgacatcgtcgccaagcgcgccccgaccaag
ttcggcctggatccgttcgacgacatccaggtgctggccccgatgtacaacgggctggcc
ggcgtcacgcgcctgaacgggctattgcaggaggcgctcaacccgcccggtgggcgcaag
atcgagcggcgcatcagcggccggacgtttcgcgtcggtgacaaggtgatgcaaacggtg
aacaattatgataaaagcgtttataatggggacatcggccgcatcaccgccatcgacgtc
atcgaacagacgatgactgtcgccatcgacggcgcgccggtagtctatagctttctggag
gtagacgaactgatccacgcctatgccgtcagcgttcacaagtcgcagggatcggagtat
ccgtgtgtggtcatcccggtggtggtgcagcattatctgatgctccagcgcaacctgctc
tacacggccatcacccgcgcccgcaagctggtgatcctggtcggcacgcgccgcgccatc
cagatcgccgtgcgcaccaaccccgtcgtcgagcggcatacggccctcgattggcggttg
aagaagtga
DBGET
integrated database retrieval system
