Candidatus Promineifilum breve: CFX0092_A1251
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Entry
CFX0092_A1251 CDS
T05438
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
pbf
Candidatus Promineifilum breve
Pathway
pbf03030
DNA replication
pbf03410
Base excision repair
pbf03420
Nucleotide excision repair
pbf03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pbf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
CFX0092_A1251 (polA)
03410 Base excision repair
CFX0092_A1251 (polA)
03420 Nucleotide excision repair
CFX0092_A1251 (polA)
03440 Homologous recombination
CFX0092_A1251 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pbf03032
]
CFX0092_A1251 (polA)
03400 DNA repair and recombination proteins [BR:
pbf03400
]
CFX0092_A1251 (polA)
Enzymes [BR:
pbf01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
CFX0092_A1251 (polA)
DNA replication proteins [BR:
pbf03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
CFX0092_A1251 (polA)
DNA repair and recombination proteins [BR:
pbf03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
CFX0092_A1251 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
CFX0092_A1251 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
5_3_exonuc
DNA_pol_A_exo1
DNA_polI_exo1
HHH_5
Motif
Other DBs
NCBI-ProteinID:
CUS03129
UniProt:
A0A160T1R8
LinkDB
All DBs
Position
I:complement(1407077..1409875)
Genome browser
AA seq
932 aa
AA seq
DB search
MTAEKLVLIDGHALAYRMFFALPLESFTTKSGEPTNATFGFTRTLLDLILAAEPPRYLAV
SFDTGATFRDDLFADYKGTREKMPDELSVQIERIKQVVRALNIPILELEGFEADDVLGTV
AGQVRGQAPVHIITGDRDLLQLVDDNTRVELPSRRPGQPGEVYDAEGVVGYLGVRPDQVV
DYKALVGDISDNIPGVKGIGEKTAVKLLAEYGTLANLYAHLDDIKGALRQKLADGRPAAD
LSYQLARIVIDAPITINLQECLTRDFDAAPVLALFRELEFRSLAKSLMAGLDAEDVAEPV
VEGQGWQPTQVVIVRDEAALEEMRQALDGAKWISFDLETDSLERMSTGIVGFCLAVAPPT
AYYVPVGHLSGAAQADSGQMNLFAGSAEPAPGQLSIARVLDAIRPALTNPAIPKVAHNAK
FDCMILERYGIDVAPVRFDTMIAEWLTDPATKHKGLKDLARHRLGAEMTDIENLIGRGKT
QVTFAQVPIETAAPYGAADADMTLRLLPLLQREVEEKGLTKLNDLEMALMPVIAAMERAG
VRIDVDFFRHMSQDLAAALLRLEQIIYEIAGEPFNINSTQQLSDILFKKLQLPREGLKKI
ASGHYSTAADVLEGLKASDSTGIIAAILEHRELGKLKSTYTDALPLLINPATGRLHTSFS
QIGAVTGRLASSNPNLQNIPIRSEVGQQLRRGFVTEPGWLFLSADYSQVELRILAHITHD
ETLVSAFRDDLDIHTATAAAIYGIPLESVTKNQRRFAKTINFGLIYGMGAFRLARETGLT
LGEAEKYVVKYFDQLPGVERYLQETKHMARTKGYVETLFGRRRYFPVFKSLMGDANRQAT
QRAEREAINHPIQGTAADIIKYAMIRLHDELTARYRARLLLQVHDELLLEVPQEEIEEVR
QLVIDVMTNAFELDVPLKVEVETGNNWLELKS
NT seq
2799 nt
NT seq
+upstream
nt +downstream
nt
atgaccgccgaaaaactggtgctcatcgacggccacgcgctggcctaccggatgttcttc
gccctgccgctggaatcgttcacgaccaagagcggcgagccgaccaacgccaccttcggt
ttcacccgcacgttgctcgatctcatcctggccgccgaaccgccgcgctatctggccgtc
agcttcgacaccggggcgacctttcgcgatgacctgttcgccgattacaagggcacgcgc
gagaagatgcccgacgaattgagcgtgcagatcgagcgcatcaagcaggtcgtccgcgcc
ctgaatatccccatcctggaactggagggattcgaggccgatgacgtgctgggcacggtg
gccggacaggtgcgcggtcaggccccggtccacatcatcaccggcgaccgcgacctgctg
caactggtggacgacaacacgcgcgtcgagctgccgtcgcggcggccggggcagccgggc
gaggtctacgacgccgagggcgtggtcggctatctcggcgtgcggcccgatcaggtggtc
gattacaaggcgttggtgggcgacatcagcgacaacatccccggcgtgaagggcatcggc
gagaagacggccgtcaagctgctggccgaatacggcacactggctaacctctacgcccac
ctcgacgacatcaagggcgcgctgcgccagaagctggctgacggccgcccggcggccgac
ctgagctaccaactggcgcgcatcgtcatcgacgcgcccatcaccatcaacttgcaggag
tgcctgacgcgcgacttcgacgccgcgccggtgctggcccttttccgcgaactggagttc
cgctcgctggccaaatctctcatggccgggctggatgccgaagacgtggccgagccggtg
gtcgaggggcagggctggcagccgacgcaggtggtcatcgtccgcgacgaggccgcgctg
gaggagatgcgccaggcattggacggcgccaagtggatcagcttcgacctggagaccgat
agtctggagcgcatgtcgaccggcatcgtcggcttctgcctggccgtggccccgcccacg
gcctactacgtgcccgtcggccacctgagcggcgcggcccaggctgactccggccagatg
aatctgttcgccgggtcggccgagccggcccccggccaactgtccatcgcccgcgtcctc
gacgccatccgcccggcgctgaccaacccggccattcccaaggtggcccacaacgccaag
ttcgactgcatgatcctggagcgctatggcatcgatgtggccccggtgcgcttcgatacg
atgatcgccgaatggctgaccgacccggcgaccaagcacaagggactgaaggatttggcc
cgccaccggctgggggcggagatgaccgacatcgaaaacctgatcggccgcggcaagacg
caggtgacgttcgcccaggtgccgattgagacggccgcgccctatggcgcggccgacgcc
gatatgaccctgcgcctgctgccgctcttgcagcgcgaagtggaagagaaggggctgacc
aagctcaacgacctggagatggccctcatgccggtcatcgccgcgatggagcgcgccggg
gtgcgcatcgacgtcgatttcttccgccatatgtcgcaagacctggcggcggcgctgctg
cggctggagcagatcatctacgagatcgccggcgagccgttcaacatcaattcgacccag
caattgagcgacatcctgttcaagaagctgcaactgccgcgcgagggcctgaagaagatc
gccagcggccactactccacggccgccgacgtgctggaagggctgaaggccagcgacagc
accggtatcatcgccgccatcctggagcaccgcgagctgggcaagctcaagagcacctac
accgacgccctgccgctgctgatcaacccggccaccggccgcctgcacaccagcttcagc
cagatcggcgcggtcaccggccggttggcgagcagcaaccccaacttgcagaacatcccc
atccgtagcgaggtcggccagcagttgcggcgcggcttcgtcaccgagccgggctggctg
ttcctgtcggccgactattcgcaggtggagttgcgcatcctggcccacatcacccacgac
gagacgctggtcagcgccttccgcgatgacctggacatccacacggccacggccgcggcc
atctacggcatcccgctggagagcgtgaccaagaatcagcgccgcttcgccaagacgatc
aacttcggcctcatctacggcatgggcgcgttccggctggcgcgcgagacgggtctgacg
ctgggcgaggccgaaaagtacgtggtcaaatatttcgaccaactgcccggcgtcgagcgc
tatttgcaggaaacgaagcacatggcccgcaccaagggctacgtggagacgctcttcggc
cgccgccgctacttcccggtcttcaaatcgttgatgggcgacgccaaccgccaggccacc
caacgggccgagcgcgaggccatcaaccaccccatccagggtacggcggccgacatcatc
aagtacgccatgatccggctgcacgacgagctaacggcccgctatcgcgcccgactgctg
ctccaggtgcacgacgagttgctgctggaagtgccccaggaagagatcgaagaggtgcgc
caactggtcatcgacgtgatgaccaatgccttcgagctggacgtgccgctcaaggtcgag
gtcgagacgggcaacaattggctggaattgaaaagttag
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