Candidatus Promineifilum breve: CFX0092_A1965
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Entry
CFX0092_A1965 CDS
T05438
Name
(GenBank) putative DNA polymerase III, alpha subunit
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
pbf
Candidatus Promineifilum breve
Pathway
pbf03030
DNA replication
pbf03430
Mismatch repair
pbf03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pbf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
CFX0092_A1965
03430 Mismatch repair
CFX0092_A1965
03440 Homologous recombination
CFX0092_A1965
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pbf03032
]
CFX0092_A1965
03400 DNA repair and recombination proteins [BR:
pbf03400
]
CFX0092_A1965
Enzymes [BR:
pbf01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
CFX0092_A1965
DNA replication proteins [BR:
pbf03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
CFX0092_A1965
DNA repair and recombination proteins [BR:
pbf03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
CFX0092_A1965
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
PHP
DNA_pol3_finger
HHH_6
tRNA_anti-codon
RecR_HhH
tRNA_anti_2
Motif
Other DBs
NCBI-ProteinID:
CUS03843
UniProt:
A0A170PGM8
LinkDB
All DBs
Position
I:complement(2189153..2193331)
Genome browser
AA seq
1392 aa
AA seq
DB search
MSGSVTNSAVTEHQPFVHLHVHSEYSLLDGLSRLDHLAKRAKALNQPALALTDHGVMFGV
MPFYKACKDNGIKPIIGIESYVSARRMTDRDPQLDRERTHLLLLAENQTGYLNLLQLASS
AQLDGYYYRPRIDLDFLAAHSEGLICTTGCMAADIPRAIGAGDMTRAHKLMGQYIDIFGP
ERFFIELQEHSIPELTAINKTLVDEMQPRYNLRFLATNDVHYTTPEEASPHDVLLCIQTG
ATVNESKRMRFTDTGYYLKSHEEMRRLFGHVPGALDNSLLIAEMCHVDLDTKGYHLPIFD
VPEGHNAPAYLRQLCEDGLIRRFGQERARTDETLRARLDHELRIIGGMGFETYFLIVWDL
CEYARRAGIWWNVRGSGAGSLVAYTLGITGIDPIANGLIFERFLNPGRVSMPDIDLDYPD
DRRSEMVEYAVRKYGQDKVAQIITFGTLGARAAIRDVGRALDVPLPEVDAVARLIPAIPG
KPAKIVNVLDKEHEFYSADLEAKYKSDPRVRELIDTAKQVEGVARHASSHAAGVIISDKP
LVQYVPLHRPTSGEAGLGGIRSISQWPMEIIEKIGLLKVDFLGLSTLTVMRLAAQLIEQR
HGVRYTMDNIPYDIGQCGPDKDSDKGMDKAFAMLGRGDVLGVFQVEGSGMRKLMMDMKPR
RFDHIIAAISLFRPGPMENIPEYIRRMHAALNDGKDVAVYHTPELKPILQDTYGILVYQE
QIIRIAAELAGYEPGEADMIRKAVSKKKRDLMDEHKAQFTAGAMARGFSREVCDAIWFDI
EFFARYGFNKAHAADYAVICCQTAYLKAHYPVEYLTALLSVDRHDTEKVAKYVTDARRLG
INVAPPVVNRAMLDFTIEDGEEEQGSRGERERGRKNRTAGAPVTPAPLHPRSPAPRSTIR
YGLAAIKNAGEGAVQLLIDERQANGSFRDPVDLAERVDLRRVGKRALESMARVGVFDEWG
SRACVLDALDRLVGHSAATHAAAEAGQMTLFGGGNGHGHKIDVSLLRAEKDVKAIDRREL
LDWEKELIGVYLTEHPLEHRLADLQGVVTARSGELDAAWNGKAITMAGLVAGLRTLNTKK
GQPMAFVTLEDLDGKVDLVMFPKVWAAHREVVQANQIIVVRGTVQVSGEAISILANSVQT
KLTIAHDAAHARALPPPPDDFDFWPPFEEQGGRGAGEQGRTSLSLGERLGEGSSSRPPTV
ALSEPVPAYVPDPTAAIPPPPDDDDEDNYLDYEATADEDAPTRPDPAAVAEAQEPLPPPV
VTMPEIITNYELRITNEEKAANGRPMTADERPPTTDERRMTVDQPPPADDYEPPTNGLSR
LLIVEIRASGNWKEACRQTLKLAGRFEGNAMLRLLLAGQDLVMDFPNHRVGSAVELIEQL
ERLPGVGRVYER
NT seq
4179 nt
NT seq
+upstream
nt +downstream
nt
atgtcggggtctgtcacaaactcagcggtaacggaacaccagcccttcgtccacctccac
gtccatagcgagtactcgctgctcgacgggctgagccgcctcgatcacctggccaagcgg
gccaaggcgctcaatcagccggcgctggccctgaccgaccacggcgtcatgttcggcgtc
atgcctttctataaggcgtgcaaggacaacggcatcaagcccatcatcggcatcgagagc
tacgtctccgcccggcgcatgaccgaccgcgacccgcaactcgaccgcgagcgcacccac
ctgctgctgctggccgagaaccagaccggctacctgaacctgctccagctcgccagcagc
gcccaacttgacggctactactatcggccgcgcatcgacctcgacttcctggccgcccac
agcgagggcctcatctgcaccaccggctgcatggccgccgacatcccccgcgccatcggt
gccggtgacatgacccgcgcccacaagctgatgggccaatacatcgacatcttcggcccg
gagcgcttcttcatcgagttgcaggagcacagcatccccgaactgacggccatcaacaaa
accctcgtcgacgagatgcagccgcgctacaacctgcgcttcctggcgaccaacgacgtg
cattacaccacgcccgaggaggcctcgccccacgacgtgctgctgtgcatccagaccggc
gcgacggtgaatgaatccaagcggatgcgcttcaccgacaccggctactacctgaagtcc
cacgaggagatgcgccgcctcttcggccacgtgcccggcgcgctcgacaacagcctcctc
atcgccgagatgtgccacgtcgatctggacaccaagggctaccacctgcccatcttcgac
gtgcccgagggccacaacgcccccgcttatctgcggcaactgtgcgaggatggcctcatc
cggcgcttcggtcaggagcgcgcccggacggacgagacactgcgcgcccgcctggatcac
gagttgcgtatcatcggcggcatgggcttcgagacctacttcctcatcgtctgggacctg
tgcgaatacgcccgccgggccggcatctggtggaacgtgcgcggctccggggcggggtcg
ctggtagcctatacgctgggcatcaccggcatcgaccccatcgccaacggcctcatcttc
gagcgcttcctgaaccccggccgcgtctccatgcccgacatcgacctcgactaccccgac
gaccgccgctcggagatggtcgaatatgccgtgcgcaaatacggccaggacaaggtggcc
cagatcatcaccttcgggacactgggcgcgcgggcggccatccgcgacgtcggccgcgcc
ctcgacgtgcccctgcccgaggtcgacgccgtggcccgcctcatcccggccatccccggc
aagccggccaagatcgtcaacgtcctcgataaggagcatgagttctactcggccgacctg
gaagccaaatacaagagcgacccgcgtgtccgcgaactgatcgacacggccaagcaggtc
gagggcgtggcccgccacgccagcagccatgccgccggggtcatcatctccgacaagccg
ctcgtccagtacgtgccgctccaccggccgaccagcggcgaggccgggctgggcggcatc
cgctccatcagccaatggccgatggagatcatcgagaagatcggcctgctcaaggtcgat
ttcctgggcctcagtactctgaccgtcatgcgcctggccgcccaactcatcgagcagcgc
cacggcgtgcggtatacgatggacaacatcccctacgacatcggccagtgcgggccggac
aaggacagcgacaaggggatggacaaggcattcgcgatgctcggccgcggcgacgtgctg
ggcgtgttccaggtggaaggctccgggatgcgcaagctgatgatggacatgaagccgcgc
cgcttcgaccacatcatcgccgccatctccctcttccggccggggccgatggagaacatc
cccgaatatatccgccgcatgcacgccgccctcaacgacggcaaggacgtggccgtctat
cacacgccggaactgaagcccatcctgcaggacacctacggcattctggtctatcaggag
cagatcattcgcatcgccgccgaactggccggctacgagccgggcgaggccgacatgatc
cgcaaggccgtgtccaagaagaagcgcgacctgatggatgagcacaaggcccagttcacc
gccggagccatggcccgcggcttctcgcgtgaggtgtgcgacgccatctggttcgacatc
gagttctttgcccgctacggcttcaacaaggcccacgccgctgactacgccgtcatctgc
tgccagacggcctacctgaaggcccactacccggtcgagtatctcaccgccctgctatcc
gtcgatcgccacgacaccgaaaaggtcgccaaatatgtcaccgacgcccgccgcctgggc
atcaacgtcgccccgccggtggttaatcgggcgatgctggattttacgattgaggatggg
gaagaagagcaggggagcaggggagaaagggagcgggggagaaagaaccggacggccggc
gcgccggtcacccctgcccccctgcacccccgctcccctgcgccccgctccaccatccgc
tacggcctggccgccatcaagaacgccggcgagggcgcggtgcaactgctcatcgacgag
cggcaagccaacggctcgttccgcgacccggtcgatttggccgagcgggtcgatttgcgg
cgggtgggcaaacgcgcgctggagtcgatggcccgcgtgggcgtcttcgacgaatggggg
tcgcgagcttgcgtcctggacgcgctcgaccggctggtgggccacagcgccgccacccac
gccgcggccgaggccgggcagatgactctcttcggcggcggcaacggccacggccacaag
atcgacgtcagcctgctgcgggccgagaaggacgtgaaagccatcgaccgccgcgagttg
ctcgactgggaaaaggaactcatcggcgtctatctgaccgagcacccgctggagcatagg
ctggccgacctgcaaggcgtcgtcaccgcccgcagcggcgaactcgacgccgcctggaac
ggcaaggccatcacgatggctggtctcgtggccgggctgcgcacgctgaataccaagaag
gggcagccgatggccttcgtcacgctggaagacctggacggcaaggtcgatctggtcatg
tttcccaaggtctgggccgctcaccgcgaggtggtgcaggccaaccagatcatcgtcgtg
cgcggcacggtgcaggtgtcgggcgaggcgatctccatcctcgccaacagcgtgcagacc
aagctgaccatcgcccacgacgccgcccacgcccgcgccttgccgccgccgccggatgat
ttcgacttctggccgccttttgaagagcaggggggcaggggggcaggggagcaggggaga
acgtccctctccctgggggagaggttaggagagggttccagcagtcgaccgccgaccgtc
gccttgtcggagccggttccggcctacgtgcccgatcccactgcggccatccccccgccg
cccgatgatgacgacgaggataactatctggactacgaagccaccgccgacgaggacgcg
ccgacgcgccccgacccggcggccgtggccgaggcccaggagccgctgccgccgccggtg
gtgacgatgccggagataattacgaattacgaattacgaattacgaatgaagagaaggcg
gcgaatggccgaccgatgacggccgacgagcggccgccgaccactgatgaacgacgcatg
accgttgaccaacctccgccggccgacgattatgagccgcccacaaacgggctatcgagg
ctgctgatcgtggagatcagagcttcgggcaactggaaagaggcctgccgccagacgctg
aagctggccgggcgcttcgagggcaatgccatgctgcggctgctactggccgggcaggat
ctggtgatggacttccccaaccatcgcgtgggcagcgccgtagaattgatcgagcagttg
gaacggttgcccggggtggggcgggtctacgaacggtag
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