Candidatus Promineifilum breve: CFX0092_A2010
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Entry
CFX0092_A2010 CDS
T05438
Symbol
mutM
Name
(GenBank) Formamidopyrimidine-DNA glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
pbf
Candidatus Promineifilum breve
Pathway
pbf03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
pbf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
CFX0092_A2010 (mutM)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pbf03400
]
CFX0092_A2010 (mutM)
Enzymes [BR:
pbf01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
CFX0092_A2010 (mutM)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
CFX0092_A2010 (mutM)
DNA repair and recombination proteins [BR:
pbf03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
CFX0092_A2010 (mutM)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
NFACT_N
HscB_4_cys
DZR
Motif
Other DBs
NCBI-ProteinID:
CUS03888
UniProt:
A0A160T488
LinkDB
All DBs
Position
I:2229240..2230052
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AA seq
270 aa
AA seq
DB search
MPELPEVETFVRALRRPLVGRTITGARNDWPRHVVVPRPDELRERVTGRRIEAIDRRGKY
LVFSLSDDETLIIHLKMTGHLSVVPAHTPPDPYAHTVFELDDGHELRFRDPRKFGRVYLV
HDPADVLAPLGPEPLPDEFTAGELAARLAGRKRVLKPLLLDQTFIAGIGNIYADEALHDA
RLLPTRRSDTLTAEEIVALHAAIRNVLALGIDREGASISSYVKADGEKGDMQNAVAVFRR
TGQSCYTCGGPIERIVLGGRSTHFCPNCQR
NT seq
813 nt
NT seq
+upstream
nt +downstream
nt
atgcccgaattacccgaagtcgaaaccttcgtccgcgctttgcgccggccgctcgtaggc
cgaacgatcaccggggcgcgcaacgactggccgcgccacgtggttgtgccgcggccggat
gaactgcgcgagcgcgtcaccggccgccgtatcgaggccatcgaccgccgtggcaaatac
ctggtcttcagcctcagcgacgacgagacgctcatcatccacctcaagatgaccggccac
ctgtcggtcgtgccggcccacacgccgcccgacccctatgcccacaccgtgttcgagctg
gacgacggccacgaactgcgcttccgcgacccgcgcaaattcggccgcgtctatctggtg
catgacccggccgacgtgctggccccactcggcccggagccgctgcccgacgaattcacc
gccggcgaactggccgcgcgtctggccgggcgcaagcgggtgctcaagccgctgctgctc
gaccagacgttcatcgccggcatcggcaatatctacgccgacgaggcgctccacgacgcc
cggctgctgcccacccggcgcagcgacacgctgacggccgaggaaatagtcgccctccac
gccgccatccggaacgtattggctctgggcatcgaccgcgagggggccagcatcagcagc
tacgtgaaggccgacggcgaaaagggggacatgcagaacgccgtggccgtctttcgccgc
acggggcagtcgtgctatacctgtggcgggccgattgagcgcattgtgttgggcgggcgg
agtacgcatttctgccccaattgccagcggtaa
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