Candidatus Promineifilum breve: CFX0092_A2102
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Entry
CFX0092_A2102 CDS
T05438
Symbol
truB
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
pbf
Candidatus Promineifilum breve
Brite
KEGG Orthology (KO) [BR:
pbf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pbf03016
]
CFX0092_A2102 (truB)
Enzymes [BR:
pbf01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
CFX0092_A2102 (truB)
Transfer RNA biogenesis [BR:
pbf03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
CFX0092_A2102 (truB)
Prokaryotic type
CFX0092_A2102 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB_C
DKCLD
Motif
Other DBs
NCBI-ProteinID:
CUS03980
UniProt:
A0A160T5J0
LinkDB
All DBs
Position
I:2328871..2329743
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AA seq
290 aa
AA seq
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MSLSGLLVIDKPLGPTSHDVVGRLRRLLGVRRVGHAGTLDPLASGLLLVGVGRATRFIEY
LVGLDKVYETVVRLGQATTTYDAEGEVTAESPVTATAADVAAALDAFRGPIRQRVPSYSA
VKRDGQPLYKAARRGETLDLPEREVTIHALDVLAYEPPLLTLRVAVSSGTYIRSLAHDLG
QALGCGGHVAGLRRTGVGRFTLADAVALDALTPENVAGYVLPAEAAVAHLARVAFDEAEA
IALGYGQRPPAPIDAPPGDAAAFGADGRFLGVVAAVGGEWRARKMVSEAD
NT seq
873 nt
NT seq
+upstream
nt +downstream
nt
gtgagcctttccggcctgctcgtcatcgataaaccgctggggccaacgtcccatgacgtg
gttggccgtctgcgccgcctgctgggcgtgcgccgcgtgggccatgccggcacgctcgac
ccgctggcgagtggcctgttgctggtcggcgtgggccgggcgacgcgcttcattgagtat
ctcgtcgggctggataaggtctacgagacggtggtgcggctggggcaggcgacgacgacc
tacgacgccgagggcgaggtgaccgccgaaagcccggtgaccgccaccgccgccgacgtg
gccgccgcgctcgacgccttccgcggccccatccgccagcgcgtgccgtcctattcggcg
gtgaagcgcgacggccagccgctctacaaagcggcgcggcgcggcgagacgctcgatctt
cccgagcgcgaggtgaccatccatgccctggatgtactggcttatgagccgcccctgttg
acgttgcgtgtggccgtgtcgtcgggcacgtatatccgctcgctggcccacgatctgggg
caggcgctgggctgtggcgggcacgtggccggtttgcgccggacgggcgtcggccgcttc
accctggccgacgcggtggcgctggacgcgctgacgccggagaacgtcgccggctatgtg
ttgccggccgaggcggccgtggctcatctggcgcgggtggcgtttgatgaggctgaggcc
atcgccctggggtacgggcaacggccgcccgcgccaatcgacgcgccgccgggggacgcg
gccgcgtttggggcggatgggcggtttctgggagtcgtggcggccgtagggggcgagtgg
cgggcgaggaagatggtcagcgaggcggactag
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