Candidatus Promineifilum breve: CFX0092_A3412
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Entry
CFX0092_A3412 CDS
T05438
Symbol
rny
Name
(GenBank) Ribonuclease Y
KO
K18682
ribonucrease Y [EC:3.1.-.-]
Organism
pbf
Candidatus Promineifilum breve
Pathway
pbf03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pbf00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CFX0092_A3412 (rny)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pbf03019
]
CFX0092_A3412 (rny)
Messenger RNA biogenesis [BR:
pbf03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
CFX0092_A3412 (rny)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_Y_N
HD
KH_1
HDOD
KH_PNO1_2nd
KH_2
KH_KhpA-B
AllH
Motif
Other DBs
NCBI-ProteinID:
CUS05290
UniProt:
A0A160T8L7
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All DBs
Position
I:complement(3732462..3733994)
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AA seq
510 aa
AA seq
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MELWIGLLIGVVVGAVIAALVTRAVLQPRIAETVAAAEAEISEKRLAAERESDNILRVSR
EETQELRLEAEKAIERRYQDLARAEERVDRRGANQDQQAKNLEQREQVLNKRQGRLDKRQ
NDLGNLEQEHRQKLEETAAMTTDEARQVLIQQVEKEAQQDLARVVREIDNRAKETAEEQA
RKIIALSIQRLAGDQVADMVVSVVPLPSDEMKGRIIGRNGRNIRAFEQAAGVDIIVDDTP
EAVTVSSFDPVRREVARRALAKLITDGRIHPARIEKLISDAQEEVERVIKESGEQAAYEA
NVHGLHPEILKTLGRLKYRTSYGQNQLNHSVEAAHIAAMLAAELGANIETAKMGALLHDL
GKAMDHDQEGTHAQIGAEFAKRFKVPAVVVNAIASHHHEVEQETIEAILVEAADAISGAR
PGARRENLENYIKRVRTLEDIATSFPGVESAYALQAGREIRVLVKPNQIDDLAAVRLSKD
ISKNIEDSMQYPGQIQVTVIRETRAVGFAK
NT seq
1533 nt
NT seq
+upstream
nt +downstream
nt
atggaactatggataggcctgctgatcggcgtggtcgtgggcgcggttatcgccgccctc
gtcacccgcgccgtcttgcagccccgtatcgccgagaccgtcgccgcggccgaggctgaa
atcagcgaaaagcgcctggccgccgagcgcgaatccgacaatatcctgcgcgtatcgcgc
gaagagactcaagagttacgactggaggccgaaaaggccatcgaacgccgctatcaggac
ctggcccgcgccgaagagcgcgtcgaccgccgcggcgccaaccaggaccaacaggccaag
aatctggaacaacgcgagcaggtgctcaacaagcgccagggccggctggataagcggcaa
aacgacctgggcaatctggaacaggagcatcgccagaagctggaagagaccgcggccatg
accaccgatgaggcgcggcaggtgctcatccagcaggtggagaaagaagcccagcaagac
ctggcccgcgtcgtgcgcgagatcgataaccgggccaaggaaacggccgaggagcaggcg
cgcaagatcatcgccctgtcgatccagcggctggccggcgatcaggtggccgacatggtc
gtgtccgtcgtgccgctgcccagcgatgagatgaaggggcgcatcatcggccgcaacggc
cgcaacatccgcgccttcgagcaggccgccggcgtcgatatcatcgtcgatgacacgccc
gaagccgtcaccgtcagtagctttgaccccgtgcgccgcgaagtggcccgccgcgccctg
gccaagctcatcaccgacggccgcatccaccccgcccgcatcgagaagctgatcagcgac
gcccaggaagaggtggagcgcgtcatcaaggaatcgggcgagcaggccgcctacgaggcc
aacgtccacgggctgcaccccgaaatcctgaaaaccctggggcggcttaaataccgcacg
tcctacggccagaaccagctcaaccactccgtcgaggcggcccacatcgccgccatgctg
gccgccgagctgggggccaacatcgagacggccaagatgggcgcgctgctccacgacctg
ggcaaggcgatggatcacgatcaggaaggcacccacgcccagatcggggccgagttcgcc
aagcgcttcaaggtaccggcggtggtcgtcaacgccatcgcctcgcaccaccacgaggtg
gagcaagagaccatcgaggccatcctggtcgaggcggccgacgccatctccggcgcccgt
cccggcgcgcggcgcgagaatttggagaactacatcaagcgcgtgcgcaccctggaagac
atcgccacgtccttccccggcgtggagagcgcctacgccctgcaagccggtcgcgagatc
cgcgtactcgtgaagcccaaccagatcgacgatctggccgccgtgcgcctgtcaaaggat
atttccaagaatatcgaggactcgatgcaatatccgggtcagattcaggtgacggtcatc
cgcgagacgcgagcggttgggttcgccaaataa
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