Candidatus Promineifilum breve: CFX0092_A3462
Help
Entry
CFX0092_A3462 CDS
T05438
Symbol
rpoA
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
pbf
Candidatus Promineifilum breve
Pathway
pbf03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
pbf00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
CFX0092_A3462 (rpoA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pbf03021
]
CFX0092_A3462 (rpoA)
03400 DNA repair and recombination proteins [BR:
pbf03400
]
CFX0092_A3462 (rpoA)
Enzymes [BR:
pbf01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
CFX0092_A3462 (rpoA)
Transcription machinery [BR:
pbf03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
CFX0092_A3462 (rpoA)
DNA repair and recombination proteins [BR:
pbf03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
CFX0092_A3462 (rpoA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
RNA_pol_A_CTD
HHH_6
Motif
Other DBs
NCBI-ProteinID:
CUS05340
UniProt:
A0A160T8Q2
LinkDB
All DBs
Position
I:3770662..3771627
Genome browser
AA seq
321 aa
AA seq
DB search
MAINNLVMPKIESTAMSAEYGRFVIGPLERGYGTTLGNALRRVLLASLPGAAVTSIRVTD
VPHEFSAIPGVREDMMQFILHIKQLRLRLVNTEIARMRLEVQGAGPVTAADIQVPPEVEI
INPDLYLFTVDSDDTYLEVEMMAETGRGYSPAEDRGRLPIGELPVDAIFSPIRRVSYEVE
KTRVGQVADYDRTVMEIWTDGTIKPEEALAQASQIMMQHLRPIAGVSEETFAAIEEEREE
ESIPNEIYDTPIEQLDLSVRVFNSLKRTGITKVGEMLEMLDRGEETMLAIRNFGDKSLDE
LKQQLRQKGFLAEEDEVKRSA
NT seq
966 nt
NT seq
+upstream
nt +downstream
nt
ttggctatcaataatcttgtcatgccgaaaattgaaagcacggccatgtcggctgaatat
ggtcgtttcgtgatcggcccgctggagcggggctatggcaccacgctgggcaacgccctg
cggcgggtgctgctggcctcgttgccgggcgcggccgtcacctcgattcgcgtcaccgat
gtgccccacgagttctcggccatccccggcgtgcgcgaagacatgatgcagttcatcctg
cacatcaagcaactgcgtctgcggctggtgaataccgaaatcgcccggatgcgcctggaa
gtgcagggcgccgggccggtcaccgcggccgacattcaggttccgccggaagtcgagatc
atcaaccccgatctctacctgttcacggttgactccgacgacacctatctggaagtggag
atgatggccgagacgggccgcggctattcgcccgccgaagatcgcggccggctgcccatc
ggcgaactgccggtggatgccatcttcagccccatccgccgcgtctcctacgaggtcgag
aagacccgcgtgggccaggtggccgactacgaccgcacggtgatggaaatctggaccgac
ggcacgatcaagcccgaagaggcgctggcccaggcctcgcagattatgatgcagcatctg
cggcccatcgccggtgtcagcgaggaaaccttcgccgccatcgaagaagagcgcgaagaa
gagtcgatccccaacgagatctacgacacgcccatcgagcagctcgacctgagcgtgcgc
gtcttcaattcgttgaagcgcaccggcatcaccaaggtcggcgagatgctggagatgctg
gatcgtggcgaagagacgatgctggcgattcgcaacttcggcgataaatcgctggatgaa
ttgaaacaacagcttcgtcagaagggtttcctggcggaagaagacgaggtcaagcgctcg
gcctga
DBGET
integrated database retrieval system
