Prionailurus bengalensis (leopard cat): 122467168
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Entry
122467168 CDS
T07574
Symbol
COL20A1
Name
(RefSeq) collagen alpha-1(XX) chain
KO
K24357
collagen type XX alpha
Organism
pbg
Prionailurus bengalensis (leopard cat)
Pathway
pbg04974
Protein digestion and absorption
Brite
KEGG Orthology (KO) [BR:
pbg00001
]
09150 Organismal Systems
09154 Digestive system
04974 Protein digestion and absorption
122467168 (COL20A1)
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Gene cluster
GFIT
Motif
Pfam:
fn3
VWA
Collagen
Pur_ac_phosph_N
VWA_2
YjeF_N
DUF4959
Laminin_G_2
Motif
Other DBs
NCBI-GeneID:
122467168
NCBI-ProteinID:
XP_043409417
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Position
A3:complement(945197..976558)
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AA seq
1317 aa
AA seq
DB search
MVHDLVSHRRCATSALVCPHLGVCLWLWLGVAVGLGQRRESGRLRLAVLPEDRLQMKWSE
SEGSSLGYLVQVKPMAGDAEQDVMLTTKAPKATVGGLSPSKGYTAQIFRLTGSGTTLLAQ
REFVIEELKRPLGAAPEPTPSHVGSPAPEPPVASSPSQDPPTLASPQFRCTPPTPVDMIF
LVDGSWSIGHSHFQQVKDFLASVIEPFDIGPDKVQVGLTQYSGDPQTEWDLSTFGAKEDV
LAAVRSLRYRGGNTFTGLALSHVLEQNLRPGAGPRPEAATVVILVTDGKSQDDARAAGRA
LKDLGVDIFAVGVKNADEAELQLLASRPLDITVHNVQDFPQLGTLAGLLSRLVCHKVQGR
SRAPAGSPSSPDTLFTPTSLVVTQVTSSSVHLSWTPAPQPPLKYRIVWQPSRGGAPKEVV
VEGPASSTELHNLTAGTQYLVSVLPVLRAGFGEGLRRLVTTAPLPPPQALALAAVTPRTI
RLTWQPSAGATRYLVRCLSASAKSQEEGREVRVGQPEVLLDGLEPGRDYDVWVQSLQGAE
ASEARGIRARTSTLAPPGHLSFSDVSHDSARVSWEGVSKPVRLFRISFASSDGSHSGEVE
APGNATSATVGPLSSSTAYSVRVTCLYPGGSSSVLTGRLTTRKVPSPSQLSVTELPGDEV
RLQWTAAAASGVLVYQIKWTPLGDGKAHEISVPGHRDAAVLPGLQSHLEYEITILAYYRD
GARSDPVSLRYTPPHRSPPSDLALASKSPDSLQVSWTPPSGHVLHYRLTYAPASGSGPEK
SISVPGLSNHVTLPNLLAASKYRVLVSAVYGAGESRTVSATGHTACPALSPDGSLSGFDL
MAAFGLVEKEYASIRGVAMEPSAFGRARTFTLFKDAQLTRRASDVHLAALPPEHTVVFLL
RLLPETPRETFALWQMTAEHSQPVLGVLLDAGRKSLTYFTHDPRATLQEVTFDLPEVRRI
FFGSFHKVHVAVGRSKVRLYVDCRKVAERPMGEAGSPPVTGFVMLGRLAKARGPRSSSAT
FQLQMLQIVCNDSWAEEDTCCELPASKDGETCPAFSSSCACSSQIPGPPGPQGPPGLPGR
NGVPGEQGFPGPRGEPGPPGQMGPEGPGGQQGSPGTQGRTVQGPVGPPGVKGEKGDHGAP
GLQGHPGHQGPPGKVGLQGPKGMRGLEGSAGLPGPPGPRGFQGTAGARGSGGQRGLPGPV
GLTGLPGPKGERGEKGEPQSLATIYQLVNQACESAIQTHVLKFHHESARPPRPILQALGH
PSSHGEAWLPGRGGRDGPHPEDGGDPGALGQRSSPRLKGSEPPGPLGGTGRPPCCPE
NT seq
3954 nt
NT seq
+upstream
nt +downstream
nt
atggtccacgacctcgtctcccacaggcggtgcgccacgagtgcccttgtgtgcccccac
ctcggggtctgcctctggctgtggctgggtgttgccgtgggactcggccagagacgagag
agcggccgcctgaggctggcggtgctgcctgaggaccggctgcagatgaagtggtcggag
tcggaggggagcagccttggctacctggtgcaggtgaagcccatggcaggggacgcggag
caggatgtgatgctgaccacgaaggcccccaaggccacggtggggggcctgagcccctcc
aagggctacaccgcacagatcttccggcttactggctcagggaccaccctgctggctcag
agggagtttgtgatagaggagctgaagaggcccctgggggcagccccggagcccacgccc
tcccatgtggggagcccagccccggagcccccagtcgcctcgtccccgagccaagacccg
cccactcttgccagcccccagttccgctgcacaccccctacacctgtggacatgatcttc
ctggtggacgggtcctggagtatcggccacagccacttccagcaggtcaaagatttcctg
gccagcgtcatcgagccctttgacatcgggccggataaagtccaagtcggcctgactcag
tacagtggagacccccagactgagtgggatctcagcaccttcggcgccaaggaggacgtg
ctggccgctgtccgcagcctccgctacagagggggaaacacgttcacaggcctggccctg
tcacacgtgctggagcagaacctgcggccgggggcggggccccgtccagaggcggccacg
gtggtgattctggtgacggacggcaagtcccaagatgacgcccgtgccgctggccgtgcc
ctcaaggacctgggtgttgacatctttgctgtgggcgtgaagaacgcggacgaggccgag
ttacagctcctggcgtcccggccgctggacatcaccgtccacaacgtgcaggactttccc
cagctgggcaccttggccggcttgctcagccgcctcgtctgccacaaggtccagggcagg
agcagggccccggcgggcagcccctcctccccggacaccctcttcactcccaccagcctg
gtcgtgacccaggtgacctcctccagcgtccacctgtcctggactccggccccccagccg
cccctcaagtatcggatcgtgtggcagccttccaggggtggcgcccccaaggaggttgtg
gtggaggggcccgcctcgtccacggagcttcacaacctgacggccggcacgcagtacttg
gtgtctgtgctccctgtcctccgggctgggttcggagagggcctgaggcgcctcgtgacc
acagcgcctctgcctccgccccaggcgctggccctggccgcagtgacacccaggaccatc
cgcctcacctggcagccgtcggccggggccacacggtacctggtgcggtgcctgtcggcc
tccgccaagagccaagaggaggggagagaggtgcgggtggggcagcccgaggtgctgctg
gacggcctggagcccggcagggactatgatgtctgggtacagagcctgcaaggggccgag
gccagtgaggctcggggcatccgcgccaggacctccaccctcgcgccccccggacacctc
agcttctcggatgtgagtcacgactcagcccgtgtttcctgggagggcgtctcgaagccc
gtgcgtctgttcaggatcagctttgcctccagtgacggcagccattcaggggaggtggag
gctcccggcaacgccacctcggccaccgtgggccctctgtcctcctccacggcgtattct
gtccgcgtcacctgcctctaccccgggggcagttcctccgtgctgaccggccgcctgact
acgcggaaagtccccagcccgagccagctctcggtgacagagctccctggggacgaggtt
cgactgcagtggacggccgccgcggcttccggcgtccttgtgtaccagatcaagtggacg
cccctgggagacgggaaggcccacgagatctctgtcccagggcaccgggacgcggcagtc
ctgcctggcctacaaagccacttggagtatgagatcaccatcctggcctactacagggat
ggggcccgcagcgacccggtgtccctccgctacacccccccgcaccggagcccgccctct
gacctggccctggcgtccaagtcacccgacagcctgcaagtcagctggacacctccaagc
ggccacgtcctccactaccggctcacctatgcgccagcctcgggctcggggcccgagaag
tcgatctctgttccaggactcagcaatcacgtgacgctccccaacctgctggcggccagc
aagtacagggtcctggtctccgcagtctatggagcgggggagagcaggactgtgtctgcc
acaggccacacggcctgccccgccctcagcccagatggctccctctcaggctttgacctc
atggcggcctttggtctggtggaaaaggagtatgcgtccatccgcggcgtcgccatggag
ccctcggcattcggccgcgccaggaccttcacactcttcaaggatgcccagctgacgcgc
cgggccagtgacgtccacctggccgccctcccaccggaacacacagttgtcttcctcctg
cgtctgctgcccgagacaccccgcgagacctttgcgctgtggcagatgacggccgagcac
tcccagcccgtcctgggggtcttgctggacgccggcaggaagtctctgacctacttcacc
cacgaccccagggccaccttgcaagaggtcacctttgacctgcccgaagtgaggaggata
ttctttggaagcttccacaaggtgcatgtggctgtgggccgctccaaggtcaggctctat
gtggactgccggaaggtggctgagaggcccatgggggaggcaggcagcccacctgttact
ggcttcgtcatgctgggacggttggccaaggcccgcgggccccggagcagttcagccacg
ttccagctccagatgctgcagatcgtgtgcaatgactcctgggcggaggaagacacgtgc
tgtgagctccctgcatcgaaggatggagagacctgccctgccttctcttcctcttgtgcc
tgttcctcgcagatcccggggcccccggggccccagggacctccgggcctccccggaagg
aacggagtcccaggagaacagggcttcccaggccccaggggagagcccgggccacctgga
cagatgggacctgagggtcccgggggtcagcaggggtcgccagggacccagggccgaacc
gtgcaggggcctgtgggtccgccaggggtcaaaggagagaagggggaccacggagccccg
ggcttgcagggccatcctggtcaccagggccctcccgggaaggtcggcctccagggacct
aagggaatgaggggtctggaggggagtgctggcctgcctggacctccgggcccgaggggc
ttccagggcacggcgggggccaggggctccggagggcagagaggactcccggggcctgtg
gggctcacggggctgccggggcccaaaggggagcgaggagagaagggggagccgcagtcc
ctggccaccatctaccagctcgtgaaccaggcctgcgagtctgccatccagactcacgtg
ctgaagttccaccatgagagcgccaggccccccaggcccatcttgcaggccctcggacac
cccagctctcacggtgaggcctggctccctggaagaggaggacgagacggcccccaccct
gaggacggaggtgaccctggcgcccttggtcagaggagcagccctcggctgaaagggagt
gagcctcccggacccctggggggaacgggacggcccccgtgctgcccggagtga
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