Prionailurus bengalensis (leopard cat): 122469980
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Entry
122469980 CDS
T07574
Symbol
LHX5
Name
(RefSeq) LIM/homeobox protein Lhx5
KO
K18493
LIM homeobox protein 5
Organism
pbg
Prionailurus bengalensis (leopard cat)
Pathway
pbg04550
Signaling pathways regulating pluripotency of stem cells
Brite
KEGG Orthology (KO) [BR:
pbg00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04550 Signaling pathways regulating pluripotency of stem cells
122469980 (LHX5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pbg03000
]
122469980 (LHX5)
Transcription factors [BR:
pbg03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain LIM
122469980 (LHX5)
BRITE hierarchy
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GFIT
Motif
Pfam:
LIM
Homeodomain
Homeobox_KN
Motif
Other DBs
NCBI-GeneID:
122469980
NCBI-ProteinID:
XP_043413108
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Position
D3:complement(10884273..10893108)
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AA seq
402 aa
AA seq
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MMVHCAGCERPILDRFLLNVLDRAWHVKCVQCCECKTNLSEKCFSREGKLYCKNDFFRRF
GTKCAGCGQGISPSDLVRKARGKVFHLNCFTCMVCNKQLSTGEELYVIDENKFVCKDDYL
SSSSLKEGSLNSVSSCTDRSLSPDLQDPLQDDPKETDNSTSSDKETANNENEEQNSGTKR
RGPRTTIKAKQLETLKAAFAATPKPTRHIREQLAQETGLNMRVIQVWFQNRRSKERRMKQ
LSALGARRHAFFRSPRRMRPLGGRLDESEMLGSTPYTYYGDYQGDYYAPGGNYDFFAHGP
PSQAQSPADSSFLAASGPGSTPLGALEPPLAGPHAADNPRFTDMISHPDTPSPEPGLPGA
LHPLPGEVFSGGPSPPFPMSGASGYSGPLSHPNPELNEAAVW
NT seq
1209 nt
NT seq
+upstream
nt +downstream
nt
atgatggtgcactgtgccggctgcgaacggcccatcctcgaccgctttctgctgaacgtg
ctggaccgcgcgtggcacgtcaaatgcgttcagtgttgcgagtgcaagacgaacctctcg
gagaagtgcttctcgcgcgagggcaagctctactgcaaaaatgacttcttcaggcgcttt
ggcactaagtgtgcgggctgtgggcaaggcatctcgcccagcgacctggtgcgcaaggcc
cgcggcaaagtgttccatctcaactgcttcacctgcatggtgtgcaacaagcagctgtcc
acgggcgaggagctctacgtcattgacgagaacaagttcgtgtgcaaggatgactacctg
agctcctccagcctcaaggagggcagcctcaactcagtgtcatcctgtacggaccgcagt
ttgtccccggacctccaggaccctctccaggacgaccccaaggagacggacaactcgacg
tcgtcggacaaggagacggccaacaacgagaacgaggagcagaactcgggcacgaagcgg
cgcggcccgcgcaccaccatcaaagccaagcagctggagacgctcaaggctgcctttgcc
gccacgcccaagcccacgcgccacatccgcgaacagttggcgcaggagaccggcctcaac
atgcgcgtcatccaggtgtggttccagaaccgacggtccaaagaacgcaggatgaaacaa
ctgagcgcgctgggcgcccggagacacgccttcttccggagtccgcggcgcatgcgtccg
ctgggcggccgcttggacgagtctgagatgttggggtccactccgtacacctactacgga
gactaccaaggcgactactacgcgcccggaggcaactacgacttcttcgcgcacggcccg
ccgtcgcaggcgcagtccccggccgactcgagcttcctggcggcgtcggggcccggctcg
acgccgctgggcgcgctggagccaccgctcgccggcccgcacgccgccgacaaccccagg
ttcaccgacatgatctcgcacccggacacgccgagccccgagccgggcctgcccggcgcg
ctgcaccccctgcccggcgaggtgttcagcggcgggcccagcccgcccttccccatgagc
ggcgccagcggctacagcggacccctgtcgcatcccaaccccgagctcaacgaggccgcc
gtgtggtaa
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