Prionailurus bengalensis (leopard cat): 122471742
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Entry
122471742 CDS
T07574
Symbol
SLX4
Name
(RefSeq) structure-specific endonuclease subunit SLX4 isoform X1
KO
K10484
structure-specific endonuclease subunit SLX4 (BTB/POZ domain-containing protein 12)
Organism
pbg
Prionailurus bengalensis (leopard cat)
Pathway
pbg03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
pbg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03460 Fanconi anemia pathway
122471742 (SLX4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pbg04121
]
122471742 (SLX4)
03400 DNA repair and recombination proteins [BR:
pbg03400
]
122471742 (SLX4)
Ubiquitin system [BR:
pbg04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul3 complex
Adoptor and target recognizing subunit (BTB)
122471742 (SLX4)
DNA repair and recombination proteins [BR:
pbg03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
122471742 (SLX4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Slx4
BTB
YlbE
zf-C2H2_4
Motif
Other DBs
NCBI-GeneID:
122471742
NCBI-ProteinID:
XP_043416657
LinkDB
All DBs
Position
E3:38744097..38765465
Genome browser
AA seq
1741 aa
AA seq
DB search
MMDESDDDFKELCATFLQRVKKNGTKEVSGERKTQKASNSTETSKPKRTKPTATKSKTLQ
GPREKKTRSGSQGPRTKRQGAPKWQESKPAPPENGGGGVPASAVLQENVQNTQTEDARDS
DSQPPPSHLTAMGPSPSKPRTAELVLQRMQQFKRADPERLQHASERCSLESAVEENLPKG
PREEMTAGDGVPWLPATESDAAVALALQQEFGQEQASLPDENLEETGLFFCQICQKNLSA
MNVTRREQHVNRCLDEAEKALAPTTPRIPECPICGRPFLTLKSRISHLKQCAVNMDVGPQ
LLLQAVRLQTVPPEGACGTLASSFSHHAGGLKRRGATNQKELQRKRRVTKPEAPSEDLLV
AMALSRSEMEQEAVPAALRLGNAFSERIRLGAEKKNRKRKAPISPPPLLVQDPETMGRLM
ADRVAQLFAEEVELSSTPPLPTSRILKEELGKAGRCLRPPGGKQNFLWEGSALTGAWALE
AFYTASLVPPMVPQRPAKALTQEPMLLPGLPDQPELGVQTPPAVPSAHPVGHGPRSPGPS
ASQREHQALQDLVDLAGEGMNASPWPCSGGPASPGGVAGMDLSPTGLPLTGFIPPSQEEQ
LERGGQTSLTLSLLLADFRAMVNNPQLSDIQLQTDSGEVLYAHKFVLYARCPLLMQYVNS
EGFFAVEDGDVKSQRALLGGVSAEAARALLHYLYTADPGVPPRLVPGLSALARRFGVSEL
VLLCEQEPDVMGSEDRPRKEKEEEDCESRAENFQELLRSMWIKEEEEAEASLKSEGCEED
REKVDEAEMEEIYEFAATQRKLLWGESTPEVKEETDRFGEDGPLSAQISLSVQVHEQPEN
AEEMGLCDQRRDEAPVKWKSVGPSTPVRLKGHGADVETAGSPEEALGRPGSSRPSRGSRT
GRKEGAFWCSAAAATEQPFSSTPRRCPEPSQTTSELQEDNGTATRKGAESPCTSAHQQAP
PLRPCLSKLLQGRSPGRPHPCPHPHHTGQSPSGASRAASQDSPSKQRRGRSLCKLLKDPG
LQKGKERGSLLECRNKGALVSPEKSPSIDLTQSKPDHLSSRSQNTPSSKNREDEIILLLD
SDEELELEQTKTKSVLDGPLEERKVLEVSTKSSELFSVIDVDADQDSFQSPPRREAELLC
GEERPPGSQGSGEGRGTPQLFCDPESGPEEDSTTDASWLVPATPLASRSRDSSSQTQITG
LRSSALVDHMAQFKPWASLENRDRPEAANTCSIARPQMSPPHLGPIIAGSPDSRGPCSPH
PGHLQHFALLAACPISGGLADSTGRLRKRSPLGPSLLNQATASEVVEVEDSEDEREVANS
SPLPDNDPPIPLDDCHWHMEPLSPIPIDRLNLELTGPLSTSSPSGYGHSPALSGTTPIRG
SLAGQRKAPEKSPRAGSPGSSRQSFLNSALWDHWDEKEQTSPELLPAAQTPSADEAQKSE
GLETPKGAHWKNLPPKEPITPMPRYSIMETPVLKKELDRFGVRPLPKRQMVLKLKEIFQY
THQTLESDSENESQSSRVLLEAPHSQTQASKTSKGSSHQENPPGGSLPPMSREEPPGPDG
DAQLPASQESVASSVDSSDSSFNSQSSSCEFGVAFESAGDEEGQEEISASQTAAQAAATE
EAVRRYIRSRPALYRKVLLYQPFELAELQAELKQHGIRMALGKLLDFLDAHCITFTTSAA
RKEKLQRKRRQPVGKKKRGRAAGQSAPPHPRPSAACERLQPPSASQASTGVSGPGDHINP
P
NT seq
5226 nt
NT seq
+upstream
nt +downstream
nt
atgatggatgagtcagacgacgattttaaggagctctgcgccacctttctccaaagggtg
aaaaagaatggcaccaaggaagtgtcgggagaaaggaagacacaaaaggcctcaaacagc
actgagacaagtaaaccaaaaaggaccaaaccaactgctaccaagagcaaaacccttcaa
ggccccagggagaagaaaactcggtctggcagccagggcccgaggactaaaaggcaaggg
gcacccaagtggcaggagagcaaaccagctccccctgagaatggagggggaggtgtgcct
gcctctgctgtgctccaggagaatgtgcagaacacccagacagaggacgctcgggacagc
gactcccagccccctccttcccatctgactgcgatggggcccagtccctccaaaccccgg
acggccgagcttgtcctgcagcgaatgcagcagttcaagagagcagatcctgagcgcctg
cagcatgcttccgaacggtgctccctggagtctgcagttgaagaaaacctcccgaagggc
cctcgagaggagatgacagcaggggacggtgtgccctggctccctgccacagagagtgac
gcggcggtggccttggccctgcagcaggagtttgggcaggaacaagcatcgttacctgat
gagaacctggaggagacagggttgttcttctgccagatctgtcaaaagaacctctcagcc
atgaacgtgacacggagggagcagcatgtgaaccggtgcttggatgaggctgaaaaggca
ctggcacccaccacaccgcggatccccgaatgcccgatttgtgggaggccgtttctcacc
ctgaagagcagaatcagtcacctgaaacagtgtgcggtgaacatggacgtgggcccccag
ctcctgctccaggccgtgcggctgcagacggttccgccggagggggcctgtggcacactg
gcatcaagcttcagccaccacgctggaggtctgaagcggaggggagccaccaaccagaag
gagctgcagaggaagcggagggtcaccaagcctgaggcgccgtccgaggacttgctggtg
gccatggccttgtcccggtctgagatggagcaggaggctgtgccagcggcgctcagactg
ggaaatgccttttctgagaggataagactgggagcagaaaagaagaaccgcaagaggaag
gcgcctatttcccctcccccgttgttagtccaggacccggagaccatggggaggctgatg
gcggatcgggtggcccagctctttgccgaggaggtggagctgtccagcacgccgccactt
cccacgagcaggattctaaaggaagagctgggaaaggccggtcggtgtctgcggccacct
ggagggaagcagaactttctgtgggaaggcagcgccctgactggagcctgggccctggaa
gccttctacacggcaagcctggtccctcccatggtgccccagcggcccgcaaaggctctt
acacaggagcccatgctcctcccagggctgcctgaccagccagagctgggagtgcagacg
ccacctgctgtccccagtgcccaccctgtaggccatggccccaggagcccaggcccctcc
gccagccagagggagcaccaggccctgcaggaccttgtggacctggcgggagaggggatg
aatgccagcccatggccctgcagtgggggaccagccagcccaggaggggttgcagggatg
gatttgtcacccactggccttccactgactgggtttatcccgccatcccaggaggagcag
ctggagaggggcggccaaacttcgctcaccctcagtttgctgctggctgacttcagagcc
atggtcaataacccacagctgagcgacatccagcttcagacagacagcggggaggtgctt
tacgcccacaagttcgtgctttatgcccgctgcccccttctcatgcagtatgtgaacagc
gaaggcttcttcgccgtggaggacggcgacgtgaagagccagcgcgcgctgctgggtggc
gtgagcgccgaggctgcccgtgcgctcctgcactatctctacaccgcggaccccggcgtg
cctccccggctggtgcccggcctgagcgctctggcccgcaggttcggcgttagcgagctt
gttcttctgtgcgaacaagagcctgatgtgatgggttcagaggacaggccacggaaggag
aaggaagaggaggactgtgaaagccgggcggagaacttccaagaactcttgaggtccatg
tggataaaggaagaggaagaagcagaggcttcattgaaatccgagggctgtgaagaagac
agagaaaaagtggatgaggcagaaatggaagagatttatgaatttgcagccactcagcgc
aagctgctctggggggagagcactccagaggtcaaggaagaaacggaccggttcggggag
gatggtcccttgtctgcacaaatctcattaagtgttcaggttcacgaacagccagaaaat
gcagaagagatgggactgtgtgaccagagaagagatgaggccccggtcaaatggaagagc
gtgggaccgtccacgcccgtgcgactcaagggccatggtgcagatgtagagacagcaggg
tccccagaggaagcactggggcgtcccggctcctctcgcccttctcggggcagccggaca
gggagaaaggaaggtgcgttttggtgctcggctgctgctgccactgaacagcccttttca
tcgactcccagaagatgccctgaaccgtcgcagacaacaagtgagctccaggaagacaat
ggcacggccacgagaaagggggcggagagtccttgtacctctgcccaccagcaggcaccc
ccgttgcgcccgtgcctgtcgaagctccttcaaggcaggagtcctggccggccacaccct
tgccctcaccctcatcacaccggccagtcgcccagcggagcttctagggcagcctcccag
gactcaccatccaagcagaggaggggcaggagcctctgcaagctacttaaagatccaggc
cttcagaaaggcaaagaacgtggttccttgttggaatgcagaaataaaggggctctggtg
tccccagaaaaatctccatccattgacctcacccaatcaaaacctgatcatttgagctcc
cggtctcagaatactccatccagcaagaacagagaagatgaaattatccttttactggac
tcagatgaagagctggagctggaacaaaccaaaacaaagtcagttcttgatggtcccctg
gaagaaaggaaagtgctagaagttagcaccaagtcttctgagctgttttccgtcatcgac
gttgatgcagatcaggattctttccaaagcccaccacgaagagaggcggaactgctgtgt
ggggaggagaggccgccagggagccagggctcaggggagggcagagggacccctcagctg
ttctgtgaccccgagagcggccctgaggaggacagcaccacagacgcctcatggctggtg
cccgccacccccctggctagcagaagccgtgactcttcatcccagacccaaataacaggc
ctcaggtccagcgctttagtggatcacatggcccagttcaaaccctgggcctccctagaa
aacagggatagacccgaagctgcaaatacgtgttcgatagccaggccccagatgtcgcca
ccgcacttgggccccatcattgcaggaagccccgacagcaggggcccatgcagtccccac
cccgggcacctccagcactttgctcttctggcggcctgtcccatctcagggggcctcgcc
gattccacggggcggctccggaagcgctcgcccctcgggcccagcctgctgaatcaggcc
accgcgagtgaggtggtggaggtggaggacagcgaagacgagcgggaggtggccaacagc
agccccctgccggacaacgaccctccgatccctcttgacgactgccactggcacatggag
cccctctctccgattccgatcgaccgcttgaatcttgagctgacggggcccctgagcacc
agtagtcccagcggttacggccactccccggccctctcgggcaccacccccatccgagga
agccttgcgggccaaagaaaggctccagagaagtcccctcgggccggctcgcctgggagc
agcaggcagagctttctgaactccgctctgtgggaccactgggatgaaaaagaacagacg
tctccagagctccttcctgcggcccagacgccgagtgctgatgaagctcagaaatcagaa
gggttagagacgccaaaaggtgctcattggaagaacttgcccccgaaagagcccataacc
ccaatgccaaggtattccatcatggagaccccggtactgaagaaagaactggataggttt
ggcgtccgccctctacccaaacgccagatggtcctgaaactgaaggagatattccagtac
actcaccagactctggagtcagactccgagaatgagagccagtcctcacgggtgctcctg
gaggcgcctcacagccagacccaagccagcaagacgtccaagggctcctcccatcaagag
aatcctcctggtggaagcctccctccaatgagcagggaggagcctccaggccctgatggt
gacgcccagctcccagcctcccaggaatcagtggcctcctccgtggacagcagtgacagc
tcctttaactcacaaagttcttcctgtgagtttggagtggcctttgagtctgcaggggat
gaagagggtcaagaggagataagtgcatcacagacggccgcccaggcggcagccacggag
gaggcagtgaggcgctacatccgctcccggccggccctctaccgcaaggtcctgctctat
cagccctttgagttggccgagctgcaggccgagctgaagcagcatggcatccgcatggcc
ctggggaagctgctggatttcctggatgcccactgtatcaccttcaccacctccgcggcc
cggaaggagaagctccagaggaagaggcggcagcccgtgggcaagaagaagcggggcagg
gccgcgggccagtccgcccctccccacccgcggccgtccgcagcctgtgagcgtctgcag
cccccctcggcgagccaggcctccacgggcgtctcggggcctggggaccacatcaacccc
ccgtga
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integrated database retrieval system
