Prionailurus bengalensis (leopard cat): 122472356
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Entry
122472356 CDS
T07574
Name
(RefSeq) LOW QUALITY PROTEIN: high mobility group protein B1-like
KO
K10802
high mobility group protein B1
Organism
pbg
Prionailurus bengalensis (leopard cat)
Pathway
pbg03410
Base excision repair
pbg04140
Autophagy - animal
pbg04217
Necroptosis
pbg04613
Neutrophil extracellular trap formation
Brite
KEGG Orthology (KO) [BR:
pbg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
122472356
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
122472356
09143 Cell growth and death
04217 Necroptosis
122472356
09150 Organismal Systems
09151 Immune system
04613 Neutrophil extracellular trap formation
122472356
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pbg03036
]
122472356
03400 DNA repair and recombination proteins [BR:
pbg03400
]
122472356
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pbg04147
]
122472356
Chromosome and associated proteins [BR:
pbg03036
]
Eukaryotic type
Nucleosome assembly factors
HMG (high mobility group) proteins
122472356
DNA repair and recombination proteins [BR:
pbg03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Other BER factors
122472356
MMR (mismatch excision repair)
Other MMR factors
122472356
Exosome [BR:
pbg04147
]
Exosomal proteins
Exosomal proteins of colorectal cancer cells
122472356
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HMG_box_2
HMG_box
HMG_WDHD1
HMG_box_5
NOA36
Nucleo_P87
Motif
Other DBs
NCBI-GeneID:
122472356
NCBI-ProteinID:
XP_043417743
LinkDB
All DBs
Position
B4:complement(75880255..75881301)
Genome browser
AA seq
213 aa
AA seq
DB search
MGKGDPKKPRGKMSSYAFFVQTCXEEHKKKHPDASVNFSEFSKKCSGRWKTMSAKEKGKF
KDMAKADKARYEREMKTYIPPKGETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGL
SIGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAQK
SKKKKEEEEDEEDEEDEEEEEDEKDEEEDDDDE
NT seq
642 nt
NT seq
+upstream
nt +downstream
nt
atgggcaaaggagatcctaagaagccgagaggcaaaatgtcatcatatgcattctttgtg
caaacttgctgagaggagcacaagaagaagcacccagatgcttcagtcaacttctcagag
ttttctaagaagtgctcagggaggtggaagaccatgtctgctaaagagaaaggaaagttt
aaagacatggcaaaggcggacaaggcccgttatgaaagagaaatgaaaacttatatccct
cctaaaggggaaacaaaaaagaagttcaaggatcccaatgcacccaagaggcctccttcg
gcctttttcttgttttgttctgagtatcgtccaaaaatcaaaggagaacatcctggccta
tccattggtgatgttgcaaagaaactgggagagatgtggaataacaccgctgcagatgac
aagcagccttatgagaagaaggctgcgaagctgaaggaaaaatatgaaaaggatattgct
gcataccgagctaaaggaaagcctgacgcagcaaaaaagggagtcgtcaaggctcaaaaa
agcaagaaaaagaaggaagaggaggaggatgaggaagatgaagaggatgaggaagaggag
gaagatgaaaaagatgaagaagaagatgatgatgatgaataa
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