KEGG   Prionailurus bengalensis (leopard cat): 122472641
Entry
122472641         CDS       T07574                                 
Symbol
OPTN
Name
(RefSeq) optineurin isoform X1
  KO
K19946  optineurin
Organism
pbg  Prionailurus bengalensis (leopard cat)
Pathway
pbg04137  Mitophagy - animal
pbg04140  Autophagy - animal
pbg05014  Amyotrophic lateral sclerosis
pbg05022  Pathways of neurodegeneration - multiple diseases
Brite
KEGG Orthology (KO) [BR:pbg00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04140 Autophagy - animal
    122472641 (OPTN)
   04137 Mitophagy - animal
    122472641 (OPTN)
 09160 Human Diseases
  09164 Neurodegenerative disease
   05014 Amyotrophic lateral sclerosis
    122472641 (OPTN)
   05022 Pathways of neurodegeneration - multiple diseases
    122472641 (OPTN)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:pbg04131]
    122472641 (OPTN)
Membrane trafficking [BR:pbg04131]
 Exocytosis
  Small GTPases and associated proteins
   Rab associated proteins
    122472641 (OPTN)
 Protein recycling
  Rab GTPases and associated proteins
   Other Rab GTPase associated proteins
    122472641 (OPTN)
 Autophagy
  Mitophagy
   PINK1-Parkin associated proteins
    122472641 (OPTN)
  Xenophagy
   Cargo receptors
    122472641 (OPTN)
SSDB
Motif
Pfam: CC2-LZ NEMO zf_C2H2_10 EDR4-like_1st Kp4 Zn_ribbon_CLPX_N DUF8106
Other DBs
NCBI-GeneID: 122472641
NCBI-ProteinID: XP_043418332
LinkDB
Position
B4:12091419..12130684
AA seq 574 aa
MSHQPLSCLTEKGDSPSETTGNGPPNLAHPNLDTFTPEELLQQMKELLTENHQLKEAMKL
NNQAMKGRFEELSAWTEKQKEERLFFEIQSKEAKERLVALSHENEKLKEELRKLKGKTER
PLEDPTGDPKVPKAEADQEMEQLKTQVARLQAEKADLLGIVSELQLKLNSGGPSEDSFVE
IRMAEGEADVALKEIKTSPGPTRTDSVDTSKFAEGARNYLEFEELTVSQLLLCLREGNQK
VERLEIALKEAKERVSYFEKKASDHAEVETQTETSKEKEKEEEKGPETVGSEVETLNLQV
TTLFKELQEAHTKLSEAELMKKRLQEKCQALERKNSATPSELNEKQELVYNNKKLELQVE
SMRSEIKMEQAKTEDEKSKVATLQVTHNKLLQEYNNSLKTIEELKRKESEKVDKVVLQEL
SEKLALAEKALASKQLQMDEMKQTIAKQEEDLETMTVLRAQMEVYCSDFHAERAAREKIH
EEKEQLALQLAILLKENNVFEDGGSRQSLMEMQSRHGARTSDPDQQAYLAQRGDEDTNWR
QQQQRNIPIHSCPKCGEVLPDIDTLQIHVMDCII
NT seq 1725 nt   +upstreamnt  +downstreamnt
atgtcccaccaaccacttagctgcctgactgaaaagggggacagccccagtgagaccaca
ggaaatggaccccccaacctggcccacccaaatctggacacgttcacaccagaggaactg
ctacagcagatgaaggagctcctgaccgagaaccatcagctcaaagaagccatgaagctg
aataatcaggctatgaaagggcgatttgaagagctttcagcctggacagagaaacagaag
gaagaacgcctattttttgagatacagagcaaggaagccaaagagcgtctcgtggctttg
agtcatgaaaatgaaaaattgaaggaagaactcagaaaactaaaagggaaaacagaaagg
ccccttgaggaccccactggggaccccaaagtccccaaggcagaagcagaccaggaaatg
gaacagctgaagacccaggtggcccgtcttcaagctgaaaaggcagatctgctgggcatc
gtgtctgaactacagctcaagctgaactcaggcggcccctcagaagactcctttgttgaa
atcaggatggctgaaggagaagcagatgtggcactgaaagaaatcaagacaagtcctggg
cccacaagaactgattccgttgacacgagcaaatttgcagaaggtgccaggaattatttg
gaatttgaagaattaactgtgagccagctcctgctttgtctaagggaaggaaaccagaag
gtggagagacttgaaattgccctcaaggaagccaaagaaagagtttcatattttgaaaag
aaagccagtgatcatgcagaagttgagacccagacagagacgagtaaagaaaaagagaaa
gaagaggagaaaggcccagaaaccgttggaagcgaagtggagacgttgaaccttcaggtg
accaccctatttaaggaacttcaagaggctcatacaaaactcagtgaagctgagctaatg
aagaagagacttcaagagaaatgtcaggcccttgaaaggaagaattctgcaaccccatca
gagctgaatgaaaagcaggagcttgtttataacaacaaaaagttggaactacaagtggaa
agcatgcgatcagaaatcaaaatggagcaagctaaaactgaagatgaaaagtccaaggta
gccactctccaggtgacacataacaagcttcttcaagaatacaataattcattgaaaacg
atcgaggaactaaaaaggaaagagtcagaaaaagtggataaggtggtactacaagaacta
agtgagaaactggcgctggcagagaaggcgctggcttccaagcagcttcagatggacgag
atgaagcagaccatcgcgaagcaggaggaggacctggagaccatgactgtcctgagggct
cagatggaagtttactgttctgactttcatgctgaaagagcagcaagagagaaaatacac
gaagaaaaggagcagctggcattgcagctggcaattctgctgaaagagaataacgttttt
gaagatggaggcagtaggcagtccttgatggagatgcagagccgtcatggggcaagaaca
agtgaccctgaccagcaggcctacctcgctcagagaggagatgaggataccaactggagg
cagcagcaacagcggaatattccaattcattcgtgccccaaatgtggagaagttctgcct
gacatagacacgctacagatccatgttatggactgcatcatttaa

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