Prionailurus bengalensis (leopard cat): 122473344
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Entry
122473344 CDS
T07574
Symbol
UPF2
Name
(RefSeq) regulator of nonsense transcripts 2
KO
K14327
regulator of nonsense transcripts 2
Organism
pbg
Prionailurus bengalensis (leopard cat)
Pathway
pbg03013
Nucleocytoplasmic transport
pbg03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
pbg00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
122473344 (UPF2)
03015 mRNA surveillance pathway
122473344 (UPF2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pbg03019
]
122473344 (UPF2)
Messenger RNA biogenesis [BR:
pbg03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
122473344 (UPF2)
mRNA cycle factors
P-body specific factors
122473344 (UPF2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MIF4G
Upf2
Motif
Other DBs
NCBI-GeneID:
122473344
NCBI-ProteinID:
XP_043419714
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All DBs
Position
B4:complement(10970344..11081334)
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AA seq
1271 aa
AA seq
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MPAERKKPASMEEKETLLNNKEKDCSERRPVSSREKPKEEIKLTAKKEVIKVPEDKKKKL
EEDKRKKEDKERKKKEEEKVKAEEELKKKEEEEKKKHEEEEKKKQEEQVKRQQEEEAAQL
KEKEESLQLHQEAWERHQLRKELRSKNQNAPDNRPEENFFSRLDSSLKKNTAFVKKLKTI
TEQQRDSLSHDFNGLNLSKYIAEAVASIVEAKLKISDVNCAVHLCSLFHQRYADFAPSLL
QVWKKHFEARKEEKTPNITKLRTDLRFIAELTIVGIFTDKEGLSLIYEQLKNIINADRES
HTHVSVVISFCRHCGDDIAGLVPRKVKSAAEKFNLSFPPSEIISPEKQQPFQNLLKEYFT
SLTKHLKRDHRELQNTERQNRRILHSKGELSEDRHKQYEEFAMSYQKLLANSQSLADLLD
ENMPDLPQDKPTPEEHGPGIDIFTPGKPGEYDLEGGIWEDEDARNFYENLIDLKAFVPAI
LFKDNEKSCQNKDSNKDDSKEAKEPKDNKEVSNPEDLELELENLEINDDTLELEGGDEAE
DLTKKLLDEQEQEDEEASTGSHLKLIVDAFLQQLPNCVNRDLIDKAAMDFCMNMNTKANR
KKLVRALFIVPRQRLDLLPFYARLVATLHPCMSDVAEDLCSMLRGDFRFHVRKKDQINIE
TKNKTVRFIGELTKFKMFTKNDTLHCLKMLLSDFSHHHIEMACTLLETCGRFLFRSPESH
LRTSVLLEQMMRKKQAMHLDARYVTMVENAYYYCNPPPAEKTVKKKRPPLQEYVRKLLYK
DLSKVTTEKVLRQMRKLPWQDQEVKDYVICCMINIWNVKYNSIHCVANLLAGLVLYQEDV
GIHVVDGVLEDIRLGMEVNQPKFNQRRISSAKFLGELYNYRMVESAVIFRTLYSFTSFGV
NPDGSPSSLDPPEHLFRIRLVCTILDTCGQYFDRGSSKRKLDCFLVYFQRYVWWKKSLEV
WTKDHPFPIDIDYMISDTLELLRPKIKLCNSLEESIRQVHDLEREFLIKLGLVNDKDSKE
SMTEGENLEEDEEEEEGGAETEEQSGNESEVNDPEEEEGSDNDDDEGEEEEEENTDYLTD
SNKENETDEENTEVMIKGGGLKHVPCVEDEDFIQALDKMMLENLQQRSGESVKVHQLDVA
IPLHLKSQLRKGPPLGGGEGEAESADTMPFVMLTRKGNKQQFKILNVPMSSQLAANHWNQ
QQAEQEERMRMKKLTLDINERQEQEDYQEMLQSLAQRPAPANTNRERRPRYQHPKGAPNA
DLIFKTGGRRR
NT seq
3816 nt
NT seq
+upstream
nt +downstream
nt
atgccagctgagcgtaaaaagccagcaagtatggaagaaaaagaaactttactaaacaac
aaggaaaaggactgcagtgaaaggcggccagtgagcagcagggagaaaccaaaagaggag
atcaaacttactgccaagaaggaggttattaaggtccctgaagataaaaagaagaaactg
gaagaagataagagaaaaaaagaagacaaggaacgaaagaaaaaagaagaagaaaaggtg
aaggcagaggaagaattaaagaaaaaagaggaagaagaaaaaaagaaacatgaagaggaa
gagaaaaagaagcaagaagagcaggtaaaacgtcagcaagaagaagaagctgcccagttg
aaagagaaagaagaatcccttcagcttcatcaagaagcttgggaacgacatcagttaagg
aaagaacttcgtagcaaaaaccaaaatgctccagacaaccgaccagaggaaaatttcttt
agccgactagactcaagcttgaagaaaaatactgcttttgtcaagaaattaaaaactatt
acggaacaacagagagactccttgtcccatgattttaatggcctaaatttaagcaaatac
attgcagaagctgtagcttctattgtggaagcaaagctgaaaatatctgatgtgaactgt
gctgtgcacttgtgttctctctttcaccagcgttatgccgactttgctccgtcacttctt
caggtttggaaaaaacattttgaagcgaggaaagaagagaaaacccctaacattaccaag
ttaagaactgatttgcgtttcattgcagaattgacaatagttgggattttcactgacaag
gaaggtctatccttaatctatgaacagctaaaaaatattattaatgctgatcgggaatcc
catactcacgtttctgtggtgattagtttttgtcgacattgtggagatgatattgctgga
cttgtaccacggaaagtgaagagtgctgcggagaagtttaatttgagtttccctcctagt
gagataattagtccagagaaacaacaacctttccagaatcttttaaaagagtactttaca
tctttgaccaaacacctgaaaagggaccacagggagcttcagaatacagagagacaaaac
aggcgtattctccattctaaaggagagctaagtgaagatagacataaacagtatgaggag
tttgctatgtcgtatcagaagttgctagcaaattctcaatccttagcagaccttttggat
gaaaatatgccagatcttcctcaagacaaaccaacaccagaagagcatgggcctggaatt
gatatctttacacctggtaagcctggagaatatgatttggaaggtggtatttgggaagat
gaagacgctcggaatttttatgagaacctcatcgatttgaaagcttttgttcctgccatc
ttgtttaaagataatgagaaaagttgtcagaataaagattccaacaaagatgattccaaa
gaggcaaaagaacctaaagataataaggaggtatcgaatcctgaagatttggaacttgag
ttggagaacctagaaattaatgatgataccttggaattagaaggtggagatgaagctgag
gatcttacaaagaaacttcttgatgagcaagaacaagaggatgaagaagccagcactgga
tctcatctcaagctcatagtagatgctttcctacagcagttgcccaactgtgtcaaccga
gatctgatagacaaggcagcaatggatttttgcatgaacatgaatacaaaagcaaatagg
aagaagttggtacgggcgctcttcatagttcccagacaaaggttggatttgctaccattt
tatgcaagattggttgctacattgcatccctgcatgtctgatgtagcagaggatctttgt
tccatgctgaggggggatttcagatttcatgtacgaaaaaaggaccagatcaatattgaa
acaaagaacaaaactgttcgttttattggagaattaactaaatttaagatgttcacaaaa
aatgatacactacattgtttaaagatgcttctatcagacttttcccatcaccatattgaa
atggcatgtactctactggaaacatgtggaagatttcttttcagatctccagaatcacac
ctgaggaccagtgtacttttggaacaaatgatgagaaagaagcaagcaatgcaccttgat
gcaagatacgttacaatggtggagaacgcatattactactgcaacccacctccagctgaa
aaaacagtgaaaaagaaacgtcctcctctccaggaatatgtccggaaacttttgtacaag
gatctctcaaaggttaccactgagaaggttttgagacagatgcgaaagttgccctggcag
gaccaagaagtgaaagactatgttatttgttgtatgataaacatctggaacgtgaaatat
aatagtattcattgtgtagccaacctcttagcaggactggtactctaccaagaagatgtt
ggaatccatgttgtggatggagttttagaagatattcgattaggaatggaggttaatcaa
cctaaatttaaccagagacgtatcagcagcgccaagttcttaggggaactttataattat
cgaatggtggaatcagctgttatttttagaactctttattcttttacttcatttggtgtt
aacccggatggctctccaagttcactagacccgcctgagcaccttttcagaattaggcta
gtgtgcactattttggatacctgtggccagtactttgacagaggttctagtaaacgaaaa
cttgattgcttccttgtatactttcagcgttatgtttggtggaagaaaagtttggaggtt
tggacgaaagaccatccatttcctattgacatagattacatgatcagtgatacactagaa
ctgctaagaccaaagatcaaactctgtaattctctggaagaatccatcaggcaggtacac
gacttggaacgagaattcttaataaaactaggcctagtaaatgataaagattcaaaagag
tctatgacagaaggagaaaatcttgaagaggatgaagaagaagaagaaggaggagctgaa
acagaagaacaatctggaaatgaaagtgaagtaaatgacccagaagaagaggagggttct
gataatgatgatgatgagggcgaggaagaagaggaagagaataccgattaccttacagat
tcaaataaagagaatgaaacagatgaagaaaatactgaggtaatgattaagggaggtgga
cttaagcatgtaccttgtgtggaagatgaggacttcattcaagctctggataaaatgatg
ctggaaaaccttcagcaacgaagtggcgaatctgttaaagtgcaccaacttgatgttgct
attcctttgcatctcaaaagccagctgaggaaagggccaccactcggtggtggggaggga
gaggcggagtctgcagacactatgccctttgtcatgttaacaagaaaaggcaataaacaa
cagtttaagatccttaatgtacccatgtcttcccaacttgctgcaaatcactggaaccag
caacaggcagaacaagaagagaggatgagaatgaaaaagctcacactagatatcaatgaa
cggcaagaacaagaagattatcaagaaatgctgcagtctcttgcccagcgcccagcccca
gcaaacaccaatcgggagcggcggcctcgttaccaacatccaaagggagcacctaatgcg
gatctaatctttaagactggtgggaggagacgttga
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