Prionailurus bengalensis (leopard cat): 122473361
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Entry
122473361 CDS
T07574
Symbol
PRPF40B
Name
(RefSeq) pre-mRNA-processing factor 40 homolog B isoform X1
KO
K12821
pre-mRNA-processing factor 40
Organism
pbg
Prionailurus bengalensis (leopard cat)
Pathway
pbg03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pbg00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
122473361 (PRPF40B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pbg03041
]
122473361 (PRPF40B)
Spliceosome [BR:
pbg03041
]
Complex A
U1 snRNP components
U1 related factors
122473361 (PRPF40B)
Complex B
122473361 (PRPF40B)
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
FF
WW
WW_TCERG1
DUF4936
RhoGAP-FF1
WW_2
Motif
Other DBs
NCBI-GeneID:
122473361
NCBI-ProteinID:
XP_043419746
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Position
B4:76289444..76310258
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AA seq
887 aa
AA seq
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MSVPDSGPRPPAAPAPFPPGPPMMPPPFMPPPGIPPPFPPMGLPPMSQRPPAIPPMPPGI
MPPMLPPMGAPPPLTQIPGMVPPMMPGMLMPAVPVTAATAPGADTASSAVAGTGPPRALW
SEHVAPDGRIYYYNADDKQSVWEKPSVLKSKAELLLSQCPWKEYKSDTGKPYYYNNQSKE
SRWTRPKDLDDLEALVKQEAAGKQQPQPPQPQPEPPPVPPGPTPMPLGLLEPEPGGSEDC
DMSEAAQPVEQGFLQQPEEGPSSAAGQHQPPQQEEEESKPEPERSGLSWSNREKAKQAFK
ELLRDKAVPSNASWEQAMKMVVTDPRYSALPKLSEKKQAFNAYKAQREKEEKEEARLRAK
EAKQTLQHFLEQHERMTSTTRYRRAEQTFGELEVWAVVPERDRKEVYDDVLFFLAKKEKE
QAKQLRRRNIQALKSILDGMSSVNFQTTWSQAQQYLMDNPSFAQDHQLQNMDKEDALICF
EEHIRALEREEEEERERARLRERRQQRKNREAFQTFLDELHETGQLHSMSTWMELYPAVS
TDVRFANMLGQPGSTPLDLFKFYVEELKARFHDEKKIIKDILKDRGFCVEVNTAFEDFAH
VISFDKRAAALDAGNIKLTFNSLLEKAEAREREREKEEARRMRRREAAFRSMLRQAVPAL
ELGTAWEEVRERFVCDSAFEQITLESERIRLFREFLQVLETECQHLHTKGRKHGRKGKKH
HRKRSHSPSGSESEEEELPPPSLRPPKRRRRNPSESGSEPSSSLDSVESGGAALGGRGSP
SSRLLLGSDHGLRKAKKPKKKTKKRRHKSNSPESETDPEEKAGKESDEKEPEQDKDRELR
RAELPNRSPGFGIKKEKTGWDTSESELSEGELERRRRTLLQQLDDHQ
NT seq
2664 nt
NT seq
+upstream
nt +downstream
nt
atgtcggttcccgattctggtccccggcccccagcagcgcctgcccccttcccaccgggg
ccccccatgatgccaccacccttcatgccccctccaggaatccccccaccctttcctcca
atgggactacctcccatgagtcagagaccgccagccatccccccaatgccacctggcatc
atgcccccaatgcttccaccaatgggggcgccaccaccactcacacagataccaggaatg
gtacctcccatgatgccaggaatgctgatgccagcggtgcctgtcaccgcagcgacggct
ccgggtgcggacacagccagctctgctgtggctgggacaggccctccgagggccctgtgg
agtgagcatgtggcccctgatgggcgcatctactactacaatgctgacgacaagcagtcc
gtgtgggagaagcccagcgtgctcaagtccaaggcagagttgctgctgtctcagtgtccc
tggaaagagtacaagtcagacacgggcaaaccttactactataacaaccagagtaaggag
tctcgctggacccggcccaaggacctggatgacctggaggctctagtcaaacaagaggct
gcagggaagcagcagccgcaaccacctcagccccagcctgagcccccacctgtgccgccc
ggccccacccctatgcctctgggccttctagagcctgagccaggtggcagtgaagattgc
gatatgtcagaggctgcccagcctgtggagcaagggtttctgcagcagccggaggagggc
cccagcagtgctgctggacagcatcagccaccgcagcaggaggaagaggaatcaaagcca
gaaccagagaggtctggcctcagttggagcaaccgggagaaagcaaagcaggccttcaag
gagctgctgagggacaaggctgtcccctccaacgcctcgtgggaacaggccatgaagatg
gtggtcaccgacccccgttacagtgccttgcccaaactgagtgagaaaaagcaggcattc
aatgcctataaggcgcagcgggagaaggaggagaaggaagaggcccggctaagggccaag
gaggccaagcagaccttgcagcatttcctggagcagcacgaacgcatgacctctaccacc
cgctaccggcgggcagaacagacctttggggagctggaggtatgggctgtggtccctgag
agggatcgaaaagaggtttatgatgatgtcctcttcttcctggccaagaaggagaaggaa
caggccaagcagctccggcgccgcaacatccaggccctgaagagcatcctggatgggatg
agtagtgtcaacttccaaaccacatggtcccaggcccagcagtacctcatggataacccc
agctttgctcaggaccaccagctgcagaacatggacaaggaagatgcactgatctgcttt
gaggagcacatccgagctttggagagggaggaggaggaggagcgggagcgggcccgcctt
cgggagcggcgtcagcaacgcaagaaccgggaggccttccagaccttcctggatgagctg
catgagacagggcagctgcactccatgtccacctggatggagctgtacccagcggtcagc
actgatgtccgctttgccaacatgctgggccagccgggctccacccctctggacttgttc
aagttctatgtggaggagttgaaggcacgattccatgatgagaagaagatcattaaggac
attcttaaggaccggggcttctgcgtggaggtgaacacagcctttgaggacttcgcccac
gtcataagctttgacaagagggctgctgcgctggacgcaggcaacatcaagctgaccttc
aatagtctgctggagaaagcagaggcacgggagagagagcgggagaaggaggaggcgcga
aggatgcggcgcagggaagctgccttccgaagcatgctgaggcaggccgtgcctgctctg
gagctgggcactgcctgggaagaggtccgtgagcgctttgtgtgcgactcagcctttgag
cagatcaccctggagtcggagcggatccggctcttccgggagttcctgcaggtactggag
actgaatgccagcacctccacaccaaaggccgaaaacatggcagaaagggcaagaagcac
catcgaaagcgttcccattcgccatcaggttctgagtcggaagaggaggagttgcccccg
ccgtctctccgaccccccaaacggagaaggcggaacccctcggagtcaggctctgagccc
tcttcctcacttgattcggttgaaagtgggggtgctgcccttggaggacggggttcccca
tcttctcgccttctccttggatcagatcatggccttcggaaagccaagaaaccaaaaaag
aaaactaagaagagaagacacaagtcgaacagtcctgagagcgagacagaccctgaggag
aaagctggcaaggagagtgatgagaaagaaccagaacaggacaaggacagggagctccgg
cgggcagaactccccaaccgctccccaggttttggaatcaagaaggagaagacgggctgg
gacacgtcggaaagtgagctgagcgagggtgagctggaaagacggcggcggacactcctg
cagcagctggatgaccaccagtga
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