Prionailurus bengalensis (leopard cat): 122474454
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Entry
122474454 CDS
T07574
Symbol
SMARCA2
Name
(RefSeq) probable global transcription activator SNF2L2 isoform X1
KO
K11647
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 2/4 [EC:5.6.2.-]
Organism
pbg
Prionailurus bengalensis (leopard cat)
Pathway
pbg03082
ATP-dependent chromatin remodeling
pbg04714
Thermogenesis
pbg05225
Hepatocellular carcinoma
Brite
KEGG Orthology (KO) [BR:
pbg00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
122474454 (SMARCA2)
09150 Organismal Systems
09159 Environmental adaptation
04714 Thermogenesis
122474454 (SMARCA2)
09160 Human Diseases
09162 Cancer: specific types
05225 Hepatocellular carcinoma
122474454 (SMARCA2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pbg03021
]
122474454 (SMARCA2)
03036 Chromosome and associated proteins [BR:
pbg03036
]
122474454 (SMARCA2)
Transcription machinery [BR:
pbg03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
122474454 (SMARCA2)
Chromosome and associated proteins [BR:
pbg03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
REST complex
122474454 (SMARCA2)
Chromatin remodeling factors
BAF complex
122474454 (SMARCA2)
PBAF complex
122474454 (SMARCA2)
GBAF(ncBAF) complex
122474454 (SMARCA2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
SnAC
Bromodomain
HSA
BRK
QLQ
ResIII
HDA2-3
DEAD
Motif
Other DBs
NCBI-GeneID:
122474454
NCBI-ProteinID:
XP_043421260
LinkDB
All DBs
Position
D4:complement(9037751..9219280)
Genome browser
AA seq
1574 aa
AA seq
DB search
MSTPTDPGAMPHPGPSPGPGPSPGPILGPSPGPGPSPGSVHSMMGPSPGPPSVSHPMPTM
GSADFPQEGIHQMHKPIDGMHDKGIVEDIHCGSMKGTGMRPPHPGMGPPQSPMDQHSQGY
MSPHPSPLGAPEHVSSPMSGGGPTPPQMPPSQPGPLLSGDPQAMSQPNRGPSPFSPVQLH
QLRAQILAYKMLARGQPLPETLQLAVQGKRTLPGMQQPQPQPQPPSQPQPQAQQPQQQAL
VNYNRPSGPGPELSGPNTPQKLPVPAPSGRPSPAPPAAAQPPAAAVPGPSVPQPAPGQPS
PILQLQQKQSRISPIQKPQGLDPVEILQEREYRLQARIAHRIQELENLPGSLPPDLRTKA
TVELKALRLLNFQRQLRQEVVACMRRDTTLETALNSKAYKRSKRQTLREARMTEKLEKQQ
KIEQERKRRQKHQEYLNSILQHAKDFKEYHRSVAGKIQKLSKAVATWHANTEREQKKETE
RIEKERMRRLMAEDEEGYRKLIDQKKDRRLAYLLQQTDEYVANLTNLVWEHKQAQAAKEK
KKRRKRKKKAEEIAEGGESALGPDGEPIDESSQMSDLPVKVTHTETGKVLFGPEAPKASQ
LDAWLEMNPGYEVAPRSDSEESDSDYEEEDEEEESSRQDTEEKILLDPNSEEVSEKDAKQ
IIETAKQDVDDEYSMQYSARGSQSYYTVAHAISERVEKQSALLINGTLKHYQLQGLEWMV
SLYNNNLNGILADEMGLGKTIQTIALITYLMEHKRLNGPYLIIVPLSTLSNWTYEFDKWA
PSVVKISYKGTPAMRRSLVPQLRSGKFNVLLTTYEYIIKDKHILAKIRWKYMIVDEGHRM
KNHHCKLTQVLNTHYVAPRRILLTGTPLQNKLPELWALLNFLLPTIFKSCSTFEQWFNAP
FAMTGERVDLNEEETILIIRRLHKVLRPFLLRRLKKEVESQLPEKVEYVIKCDMSALQKI
LYRHMQAKGILLTDGSEKDKKGKGGAKTLMNTIMQLRKICNHPYMFQHIEESFAEHLGYS
NGVINGAELYRASGKFELLDRILPKLRATNHRVLLFCQMTSLMTIMEDYFAFRNFLYLRL
DGTTKSEDRAALLKKFNEPGSQYFIFLLSTRAGGLGLNLQAADTVVIFDSDWNPHQDLQA
QDRAHRIGQQNEVRVLRLCTVNSVEEKILAAAKYKLNVDQKVIQAGMFDQKSSSHERRAF
LQAILEHEEENEEEDEVPDDETLNQMIARREEEFDLFMRMDMDRRREDARNPKRKPRLME
EDELPSWIIKDDAEVERLTCEEEEEKIFGRGSRQRRDVDYSDALTEKQWLRAIEDGNLEE
MEEEVRLKKRKRRRNVDKDPAKEDVEKAKKRRGRPPAEKLSPNPPKLTKQMNAIIDTVIN
YKDRCNVEKVPGNSQLEIEGNSSGRQLSEVFIQLPSRKELPEYYELIRKPVDFKKIKERI
RNHKYRSLGDLEKDVMLLCHNAQTFNLEGSQIYEDSIVLQSVFKSARQKIAKEEESEDDS
NEEEEEEDEEESESEAKSVKVKIKLNKKDEKGRDKGKGKKRPNRGKAKPVVSDFDSDEEQ
EENEQSEASGTDDE
NT seq
4725 nt
NT seq
+upstream
nt +downstream
nt
atgtccacgcccacagaccctggcgcgatgccccatccagggccctcgccagggcccgga
ccctctcctggaccaattcttggacctagtccaggacccggaccatccccaggttctgtc
cacagtatgatggggccgagtcccggacctcccagtgtctcacaccccatgccaacaatg
gggtctgccgacttcccgcaggaaggcatacatcaaatgcataagcccatcgatggtatg
cacgacaaggggattgtagaagatatccattgtggatccatgaagggcaccggtatgcgg
ccaccgcacccaggcatgggtcctccccagagtccgatggatcaacacagccaaggctac
atgtcgccgcacccgtctccgctgggagccccagagcacgtctccagtcctatgtcgggg
ggcggcccgaccccaccccagatgccgcccagccagccggggcccctcctgtcgggcgat
ccgcaggcgatgagccagcccaacagaggtccctcgcctttcagccccgtccagctgcat
cagctgcgagctcagattttagcttacaaaatgctggcccgcggccagcccctccccgaa
acgctgcagcttgcagtgcaggggaaaaggacgttgcccggcatgcagcagccgcagccg
cagccccagccgccctcgcagccccagccgcaggcacagcagccgcagcagcaggccctt
gttaactacaacagaccatctggcccggggccggagctgagtggcccgaacaccccgcag
aagctgccggtgcccgcgcccagcggccggccctcgcccgccccccccgccgccgcgcag
ccccccgccgccgccgtgcccgggccctccgtgccacagccggccccggggcagccgtcg
cccatcctgcagctgcagcagaagcagagccgtatcagccccatccagaaaccgcagggc
ctggaccccgtggagatcctgcaggagcgcgagtacagactccaggcccgcatagctcat
aggatccaagaactggaaaatctgcctggctctctgccaccagatttacgaaccaaagca
actgtggagctgaaagcacttcgcttactcaatttccagcgtcagctgagacaagaggtg
gtggcctgcatgcgacgagacacaaccctggagacggccctcaactccaaagcatacaaa
cggagcaagcgccagaccctgagggaggcccgcatgacagagaaactggagaagcagcag
aagattgagcaggaaaggaagcgtcgacagaagcaccaggagtacctgaacagtattttg
cagcatgcaaaagattttaaggaataccatcggtctgtggccgggaagatccagaagctg
tccaaagcagtggcaacttggcacgccaacacggaaagagagcagaaaaaagagacagag
cgtatcgaaaaggagagaatgcgaagactgatggctgaagatgaagagggctacagaaaa
ctgattgatcaaaagaaagacaggcgtttagcttaccttttgcagcagactgatgagtat
gtggccaacctgaccaacctggtctgggagcacaagcaagcccaggccgccaaagagaag
aagaagaggaggaagaggaagaagaaggctgaagagattgccgagggaggagagtctgcc
ctgggaccagacggagagcccatagatgaaagcagtcagatgagtgacctccctgtcaaa
gtgactcacacagaaactggcaaggtcctgtttggaccagaagcacccaaagcaagtcag
ctggacgcctggttggagatgaatcctggttacgaagtcgccccccgatccgacagcgaa
gagagtgattctgattacgaggaggaggatgaagaagaggagtccagtcggcaggacaca
gaagagaaaatacttctggatccaaacagtgaagaggtttctgagaaggatgccaagcag
atcattgagacagcgaagcaagacgtggatgatgagtacagcatgcagtacagtgccagg
ggctcccagtcctactacacggtggcccatgccatctcggagagggtggagaagcagtcc
gccctcctcatcaacgggaccctgaagcattatcagctccagggcctggaatggatggtt
tccctgtataataacaatttgaacgggatcttagctgatgaaatggggctaggaaagacc
atacagaccattgccctcatcacttatctgatggagcacaaaagactcaatggcccctat
ctcatcattgttcccctttcgactctgtctaactggacatatgaatttgacaaatgggct
ccttctgtggtgaaaatttcttacaagggcacccctgccatgcgtcgctcccttgtcccc
cagctgcggagtggcaaattcaacgtcctcttgactacttatgagtacattatcaaagac
aagcacattcttgcaaagattcggtggaaatacatgatagtggatgaaggccaccgaatg
aagaatcaccactgcaagctgactcaggtcttgaacactcactatgtggcccccagaagg
atcctgttgaccgggaccccactgcagaataagcttccggaactctgggccctccttaac
ttcctcctccccacgatttttaagagctgcagcacgtttgaacagtggtttaatgctcca
tttgccatgactggagaaagggtggacttgaatgaagaagaaactatattgatcatcagg
cgcctgcacaaggtgttgagaccatttttattgaggaggctgaagaaagaagttgaatcc
cagctgccagaaaaagttgaatatgtgatcaagtgtgacatgtcagccctgcagaagatt
ctctatcgccatatgcaagccaaagggatcctcctcacagatggttccgagaaagataag
aaggggaaaggaggtgccaagacacttatgaacactattatgcagttgaggaaaatctgc
aaccacccatatatgttccagcacatcgaggaatcctttgctgaacacctgggctattca
aatggggtcatcaatggggctgaactgtatcgggcctcaggaaagtttgagcttcttgat
cgtattctgcccaaactgcgagctactaatcaccgcgtgctgcttttctgccagatgacc
tcgctcatgaccatcatggaggattactttgcttttcggaacttcctctaccttcgcctt
gacggcaccaccaagtctgaggaccgcgccgctctgctgaagaaattcaacgaacccggg
tcccagtatttcatcttcttgctgagcaccagagctggcggcctgggcttgaaccttcag
gcagctgataccgtggtcatctttgacagtgactggaatcctcaccaggatctacaagca
caagaccgagctcaccgcatcggccagcagaacgaggtccgggtgctgaggctgtgcact
gtcaacagcgtggaggaaaagattctcgcggccgcgaaatacaagctgaacgtggatcag
aaagtgatccaggcgggtatgtttgatcagaagtcttcaagccacgagcggagggcattc
ctgcaggccatcctggagcacgaagaggaaaacgaggaagaagatgaagtgcccgacgat
gagaccctgaaccaaatgattgctcgacgagaggaagaatttgatctttttatgcgcatg
gacatggaccgacggagggaagatgccaggaacccaaagcgtaagccccgcttgatggag
gaagatgagctgccctcctggattattaaggatgacgccgaagttgaacggctcacatgt
gaggaagaggaggagaaaatatttggtaggggttctcgccagcgccgggacgtggactac
agcgacgccctcacggagaagcagtggctgagggccatcgaagacggcaatttggaagaa
atggaagaggaggtacggctcaagaagcggaaaagacgaagaaatgtggataaagatccc
gccaaagaagacgtggaaaaggctaagaagagaagaggccgccctccagccgagaaacta
tcccccaatccccccaaactgaccaagcagatgaacgcaatcattgataccgtaataaac
tacaaagacaggtgtaacgtggagaaggtgcccggtaattctcagttggaaatagaagga
aacagttcagggcggcagctcagtgaagtcttcattcagttaccttcaaggaaagagtta
ccagaatactatgaattaattaggaagccggtggatttcaaaaaaataaaggagaggatt
cgtaatcacaaataccggagcctgggtgacctggagaaagatgtcatgcttctctgtcac
aacgctcagacgttcaacttggagggatctcagatctatgaagactcgatcgtcttacag
tctgtgtttaagagcgctcggcagaaaattgccaaagaggaagagagtgaggacgacagc
aacgaggaggaggaggaggaagatgaagaggagtccgagtcagaggcaaaatccgtcaag
gtgaaaatcaagctcaataaaaaagacgagaaaggccgggacaaaggcaaaggcaagaaa
aggccgaatcgaggaaaagccaagcccgtagtgagtgatttcgacagcgatgaggagcaa
gaggaaaacgaacagtcagaagcaagcgggactgacgatgagtga
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integrated database retrieval system
